Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_A16
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75550-2|CAA99928.2|  421|Caenorhabditis elegans Hypothetical pr...    48   7e-06
AL021491-1|CAA16373.2|  319|Caenorhabditis elegans Hypothetical ...    28   10.0 

>Z75550-2|CAA99928.2|  421|Caenorhabditis elegans Hypothetical
           protein T22C1.3 protein.
          Length = 421

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 20/69 (28%), Positives = 41/69 (59%)
 Frame = +3

Query: 252 RVEIATPLNSWKRLIEGVYLYDQNINPYEGDAFHESPIVLVIFHYLLKHVPYSLPFIFSA 431
           RVE+ + + S+++L + + + D  +NP+E    H  P+ L +F +LL   P  +  +F +
Sbjct: 50  RVELTSVVYSFEKLKDSIAMVDDGLNPFEAKNMHFPPLTLHLFRFLLNTAPTMILPLFIS 109

Query: 432 MDLLTAYLL 458
           +D+ T ++L
Sbjct: 110 IDVATTWIL 118


>AL021491-1|CAA16373.2|  319|Caenorhabditis elegans Hypothetical
           protein Y44A6B.1 protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 375 IFHYLLKHVPYSLPFIFSAMDLLTAYLLYKTSRGFVRIFLNCQEKYLSD 521
           IFH   +   +    +F ++   +  LLY+ S  F+RIF N +   LS+
Sbjct: 219 IFHRSRQRQSFERMLLFQSISTTSVLLLYEVSNLFIRIF-NAEYMSLSE 266


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,162,632
Number of Sequences: 27780
Number of extensions: 384572
Number of successful extensions: 885
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)