Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_A16
         (870 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    27   0.30 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.7  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   3.7  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   3.7  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   6.4  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   6.4  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   6.4  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 170 GCGCKICNSRLS*VLAYSYRLLAYTIQ 250
           GC CK CNS+     A    L  YT++
Sbjct: 434 GCECKTCNSKTKCCFAQDDGLCPYTLK 460



 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 650 NCCCHPNTVQYRVWIK*ID 594
           N  C PN   Y VWI  +D
Sbjct: 579 NHSCDPNLAVYGVWINCLD 597


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 717 HRILSHIHEPHHKVLQ 670
           H  +S+IH+P H+ L+
Sbjct: 369 HVAISYIHDPDHRYLE 384


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 362 DSVSDFPLSFKTCP 403
           DSVSD+PL  K  P
Sbjct: 393 DSVSDYPLELKGSP 406


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = -1

Query: 201 SRLLHILQPHPFFD*LLI-NICYVKDVCG 118
           S +L +   HP    LL   +CY  DVCG
Sbjct: 350 SAILAMRLSHPLHGNLLPPGVCYTCDVCG 378


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 641 NNSFAEYVVSCSTLWCG 691
           +N   E ++   TLWCG
Sbjct: 22  DNELEERIIYPGTLWCG 38


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 641 NNSFAEYVVSCSTLWCG 691
           +N   E ++   TLWCG
Sbjct: 27  DNELEERIIYPGTLWCG 43


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 641 NNSFAEYVVSCSTLWCG 691
           +N   E ++   TLWCG
Sbjct: 27  DNELEERIIYPGTLWCG 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,500
Number of Sequences: 438
Number of extensions: 4861
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)