Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_A13
(950 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.008
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.008
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.008
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.17
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.30
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.30
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.40
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 33 0.40
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 32 0.69
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.92
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 0.92
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 0.92
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 0.92
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 0.92
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.2
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 1.2
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 1.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.6
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 1.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.1
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 30 2.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.8
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 30 2.8
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 29 3.7
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 3.7
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 3.7
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 3.7
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 29 3.7
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 29 3.7
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 3.7
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.9
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 4.9
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 4.9
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 29 4.9
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 4.9
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 4.9
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 4.9
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 29 4.9
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical pr... 29 6.5
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 6.5
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 6.5
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 6.5
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 28 8.5
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 28 8.5
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 28 8.5
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 28 8.5
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 28 8.5
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 28 8.5
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 28 8.5
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 28 8.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.5
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 28 8.5
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 28 8.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 8.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 8.5
AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen prot... 28 8.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.3 bits (85), Expect = 0.008
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +1
Query: 571 PXPXGLAPXKXGXPXXPPXTXXXPXPPPRGPPVXXXDRPXXP 696
P P GL P G P PP P PPP PP P P
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 32.3 bits (70), Expect = 0.52
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 8/50 (16%)
Frame = +1
Query: 571 PXPXGLAPXKXGXP------XXPPXTXXXPXPPPRG--PPVXXXDRPXXP 696
P P GL P G P PP T P PPP G PP+ P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 31.1 bits (67), Expect = 1.2
Identities = 31/117 (26%), Positives = 33/117 (28%), Gaps = 2/117 (1%)
Frame = +1
Query: 604 GXPXXPPXTXXXPXPPPRGPPVXXXDRPXXPXXRKKXXXXXXXXXXXXXXXP--AGXXXX 777
G PP T P PPP PP+ P P P +G
Sbjct: 702 GSSALPPITGGPP-PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 778 XXPGXGGTPXXXPPXXXTXPPGGKNXXXPXAXKNXXGPAPXXXXRXPXXPXXPXXXP 948
P GG P PP PPGG P P P P P P P
Sbjct: 761 PPPPPGGCPPPPPP----PPPGGFKGGPP--------PPPPPGMFAPMAPVIPDYLP 805
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPP 245
GP P GG P G PPP P PP P G PP
Sbjct: 741 GPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAG---PPXXPSGSXSXXPP 245
GP P GG P PPP P +G PP P G PP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 6/51 (11%)
Frame = -2
Query: 379 PXGXXPRGGGPSSXXX---GXLPPPXPXXPGX---AGPPXXPSGSXSXXPP 245
P G P GGP G PPP P PG PP P G + P
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.3 bits (85), Expect = 0.008
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +1
Query: 571 PXPXGLAPXKXGXPXXPPXTXXXPXPPPRGPPVXXXDRPXXP 696
P P GL P G P PP P PPP PP P P
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 32.3 bits (70), Expect = 0.52
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 8/50 (16%)
Frame = +1
Query: 571 PXPXGLAPXKXGXP------XXPPXTXXXPXPPPRG--PPVXXXDRPXXP 696
P P GL P G P PP T P PPP G PP+ P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 31.1 bits (67), Expect = 1.2
Identities = 31/117 (26%), Positives = 33/117 (28%), Gaps = 2/117 (1%)
Frame = +1
Query: 604 GXPXXPPXTXXXPXPPPRGPPVXXXDRPXXPXXRKKXXXXXXXXXXXXXXXP--AGXXXX 777
G PP T P PPP PP+ P P P +G
Sbjct: 702 GSSALPPITGGPP-PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 778 XXPGXGGTPXXXPPXXXTXPPGGKNXXXPXAXKNXXGPAPXXXXRXPXXPXXPXXXP 948
P GG P PP PPGG P P P P P P P
Sbjct: 761 PPPPPGGCPPPPPP----PPPGGFKGGPP--------PPPPPGMFAPMAPVIPDYLP 805
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPP 245
GP P GG P G PPP P PP P G PP
Sbjct: 741 GPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAG---PPXXPSGSXSXXPP 245
GP P GG P PPP P +G PP P G PP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 6/51 (11%)
Frame = -2
Query: 379 PXGXXPRGGGPSSXXX---GXLPPPXPXXPGX---AGPPXXPSGSXSXXPP 245
P G P GGP G PPP P PG PP P G + P
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.3 bits (85), Expect = 0.008
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +1
Query: 571 PXPXGLAPXKXGXPXXPPXTXXXPXPPPRGPPVXXXDRPXXP 696
P P GL P G P PP P PPP PP P P
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 32.3 bits (70), Expect = 0.52
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 8/50 (16%)
Frame = +1
Query: 571 PXPXGLAPXKXGXP------XXPPXTXXXPXPPPRG--PPVXXXDRPXXP 696
P P GL P G P PP T P PPP G PP+ P P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 31.1 bits (67), Expect = 1.2
Identities = 31/117 (26%), Positives = 33/117 (28%), Gaps = 2/117 (1%)
Frame = +1
Query: 604 GXPXXPPXTXXXPXPPPRGPPVXXXDRPXXPXXRKKXXXXXXXXXXXXXXXP--AGXXXX 777
G PP T P PPP PP+ P P P +G
Sbjct: 285 GSSALPPITGGPP-PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 778 XXPGXGGTPXXXPPXXXTXPPGGKNXXXPXAXKNXXGPAPXXXXRXPXXPXXPXXXP 948
P GG P PP PPGG P P P P P P P
Sbjct: 344 PPPPPGGCPPPPPP----PPPGGFKGGPP--------PPPPPGMFAPMAPVIPDYLP 388
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPP 245
GP P GG P G PPP P PP P G PP
Sbjct: 324 GPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAG---PPXXPSGSXSXXPP 245
GP P GG P PPP P +G PP P G PP
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 6/51 (11%)
Frame = -2
Query: 379 PXGXXPRGGGPSSXXX---GXLPPPXPXXPGX---AGPPXXPSGSXSXXPP 245
P G P GGP G PPP P PG PP P G + P
Sbjct: 331 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +3
Query: 213 PFXXXPXKPXXGGXXXXL-PEGXXGGPAXPGXXGXGGGXXPXXXDDGPP-PRG 365
P P KP GG P G G PG GGG P GP PRG
Sbjct: 143 PVVPTPCKPCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPGPPGPKGPRG 195
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPP 245
GP G G P G P P PG GP P S P
Sbjct: 161 GPPGRPGSDGQPGRPATGGGAAPRPGPPGPKGPRGAPGNSGRAGAP 206
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSG 266
GP G +GG P G PPP PG G P P G
Sbjct: 182 GPPGHGGQGGPPGHGGMGG-PPPGQGGPGGPGGPGGPGG 219
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -2
Query: 697 RAXXXGRXXXPGARGXGGXXGXXXXGGXRXCRXXGXPXPGXGG 569
R G PG G GG G GG G P PG GG
Sbjct: 165 RGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGG 207
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3
Query: 246 GGXXXXLPEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
GG G GGP PG G GG GPPP P GP
Sbjct: 169 GGMGGPPGHGGMGGP--PGHGGQGGPPGHGGMG-GPPPGQGGPGGP 211
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSG 266
GP G +GG P G PPP PG G P P G
Sbjct: 462 GPPGHGGQGGPPGHGGMGG-PPPGQGGPGGPGGPGGPGG 499
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -2
Query: 697 RAXXXGRXXXPGARGXGGXXGXXXXGGXRXCRXXGXPXPGXGG 569
R G PG G GG G GG G P PG GG
Sbjct: 445 RGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGG 487
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3
Query: 246 GGXXXXLPEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
GG G GGP PG G GG GPPP P GP
Sbjct: 449 GGMGGPPGHGGMGGP--PGHGGQGGPPGHGGMG-GPPPGQGGPGGP 491
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -2
Query: 364 PRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPPXXGXXG 227
P GP G PP P PG GPP P+G P G G
Sbjct: 420 PGSYGPPQGGPGGFGPPPPGGPGAYGPP--PTGFPPVGAPPPGAAG 463
Score = 31.5 bits (68), Expect = 0.92
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -2
Query: 364 PRG-GGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPP 245
P+G GGP G PP P PG GPP G PP
Sbjct: 400 PQGPGGPGGY--GPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 PEGXXGGPAXPGXXGXGGGXXP-XXXDDGPPPRGXXPXGP 383
P G G P PG G GG P GPP P GP
Sbjct: 253 PAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGP 292
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.52
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -2
Query: 364 PRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPPXXG 236
P G P G +PPP P G PP G PP G
Sbjct: 70 PNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFG 112
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPPXXG 236
GP G P P G +PPP P G PP G+ PP G
Sbjct: 79 GPGGIPP----PPPMFAGGIPPPPPMMGGIPPPPPM-FGAPPPPPPPSG 122
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 32.3 bits (70), Expect = 0.52
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -2
Query: 394 CXXXGPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPP 245
C P P GP P P PG AG P PSG PP
Sbjct: 154 CEPSTPPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPP 203
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXX-------PGXAGPPXXPSG 266
GP G + G S+ G PP P PG AGPP P G
Sbjct: 245 GPAGPDGQSGSGSAGGPGPKGPPGPAGQPGSDGNPGTAGPPGNPGG 290
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 228 PXKPXXGGXXXXLPEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P +P P G G P G G GG P G P G P GP
Sbjct: 153 PCEPSTPPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAG--PSGPGPAGP 202
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -2
Query: 382 GPXGXX--PRGGGPSSXXXGXLPPPXPXXPGXAGPP 281
GP G P G GP+ G P PG AGPP
Sbjct: 174 GPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPP 209
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 31.9 bits (69), Expect = 0.69
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -2
Query: 382 GPXGXXPRGG-GPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPP 245
GP G PRG GP+ + P PG GPP P G PP
Sbjct: 214 GPKG--PRGTPGPTGPKNFYITSGPPGPPGPPGPPGNPGGIGPRGPP 258
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 282 GGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
GGP PG G G P D P G P GP
Sbjct: 215 GGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGP 248
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 364 PRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPP 245
P GGP PP P G G P PSG PP
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +3
Query: 213 PFXXXPXKPXXGGXXXXLPEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P P +P GG P G G PG G G GP P G P GP
Sbjct: 141 PVTQPPCQPCPGG-----PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG--PPGP 190
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 282 GGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
GGP PG G G P D P G P GP
Sbjct: 215 GGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGP 248
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 364 PRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPP 245
P GGP PP P G G P PSG PP
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +3
Query: 213 PFXXXPXKPXXGGXXXXLPEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P P +P GG P G G PG G G GP P G P GP
Sbjct: 141 PVTQPPCQPCPGG-----PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG--PPGP 190
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 31.5 bits (68), Expect = 0.92
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 6/58 (10%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLP----PPXPXXPGXAGPPXXPSG--SXSXXPPXXGXXG 227
GP G P GG P P P P P A P P G + S PP G G
Sbjct: 186 GPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPG 243
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 282 GGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
GGP PG G G P D P G P GP
Sbjct: 215 GGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGP 248
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 364 PRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPP 245
P GGP PP P G G P PSG PP
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +3
Query: 213 PFXXXPXKPXXGGXXXXLPEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P P +P GG P G G PG G G GP P G P GP
Sbjct: 141 PVTQPPCQPCPGG-----PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG--PPGP 190
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 282 GGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
GGP PG G G P D P G P GP
Sbjct: 215 GGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGP 248
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 364 PRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPP 245
P GGP PP P G G P PSG PP
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +3
Query: 213 PFXXXPXKPXXGGXXXXLPEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P P +P GG P G G PG G G GP P G P GP
Sbjct: 141 PVTQPPCQPCPGG-----PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG--PPGP 190
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +3
Query: 213 PFXXXPXKPXXGGXXXXLPEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P P KP G P G G P PG G G P PRG P GP
Sbjct: 141 PTTPPPCKPCPQGPPG--PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRG--PPGP 193
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/110 (22%), Positives = 27/110 (24%), Gaps = 3/110 (2%)
Frame = +1
Query: 571 PXPXGLA--PXKXGXPXXPPXTXXXPXPPPRGPPVXXXDR-PXXPXXRKKXXXXXXXXXX 741
P P G P + G P P P PRGPP + P
Sbjct: 158 PGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTP 217
Query: 742 XXXXXPAGXXXXXXPGXGGTPXXXPPXXXTXPPGGKNXXXPXAXKNXXGP 891
P PG G P P P G P GP
Sbjct: 218 GAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGP 267
>Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical
protein T06D8.9 protein.
Length = 316
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 273 GXXGGPAXPGXXGXGGGXXPXXXDDGPPP 359
G GGP PG G GGG P PPP
Sbjct: 184 GGSGGPGGPGSGGGGGG--PGGYPSAPPP 210
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 556 PXAAXPXPXGLAPXKXGXPXXPPXTXXXPXPPPRGPPVXXXDRPXXP 696
P P P P PP T P PPP PP+ P P
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPP 812
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 556 PXAAXPXPXGLAPXKXGXPXXPPXTXXXPXPPPRGPPVXXXDRPXXP 696
P P P P PP T P PPP PP+ P P
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPP 812
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +3
Query: 213 PFXXXPXKPXXGGXXXXLPEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P P KP G P G G P PG G G P PRG P GP
Sbjct: 136 PTTPPPCKPCPQGPPG--PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRG--PPGP 188
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/110 (22%), Positives = 27/110 (24%), Gaps = 3/110 (2%)
Frame = +1
Query: 571 PXPXGLA--PXKXGXPXXPPXTXXXPXPPPRGPPVXXXDR-PXXPXXRKKXXXXXXXXXX 741
P P G P + G P P P PRGPP + P
Sbjct: 153 PGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTP 212
Query: 742 XXXXXPAGXXXXXXPGXGGTPXXXPPXXXTXPPGGKNXXXPXAXKNXXGP 891
P PG G P P P G P GP
Sbjct: 213 GAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGP 262
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +3
Query: 213 PFXXXPXKPXXGGXXXXLPEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P P KP G P G G P PG G G P PRG P GP
Sbjct: 136 PTTPPPCKPCPQGPPG--PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRG--PPGP 188
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/110 (22%), Positives = 27/110 (24%), Gaps = 3/110 (2%)
Frame = +1
Query: 571 PXPXGLA--PXKXGXPXXPPXTXXXPXPPPRGPPVXXXDR-PXXPXXRKKXXXXXXXXXX 741
P P G P + G P P P PRGPP + P
Sbjct: 153 PGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTP 212
Query: 742 XXXXXPAGXXXXXXPGXGGTPXXXPPXXXTXPPGGKNXXXPXAXKNXXGP 891
P PG G P P P G P GP
Sbjct: 213 GAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGP 262
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -2
Query: 373 GXXPRGGGPSSXXXGXLPPPXPXXPGXA-GPPXXPSGSXSXXPPXXGXXG 227
G PR P S G PPP P PG GPP P P G G
Sbjct: 282 GMTPRPPPPPSS--GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG 329
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/97 (23%), Positives = 26/97 (26%), Gaps = 1/97 (1%)
Frame = +1
Query: 556 PXAAXPXPXGLAPXKXGXPXXPPXTXXXPXPPPRGPPV-XXXDRPXXPXXRKKXXXXXXX 732
P + P P + P P PP PPP PP P P
Sbjct: 267 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 326
Query: 733 XXXXXXXXPAGXXXXXXPGXGGTPXXXPPXXXTXPPG 843
P P GG P PP + PG
Sbjct: 327 PPGMGGMPPPPPPGMRYP--GGMPPPPPPRYPSAGPG 361
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 325 LPPPXPXXPGXAGPPXXPSGSXSXXPP 245
+PPP P PG P P S PP
Sbjct: 273 MPPPMPPTPGMTPRPPPPPSSGMWPPP 299
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -2
Query: 373 GXXPRGGGPSSXXXGXLPPPXPXXPGXA-GPPXXPSGSXSXXPPXXGXXG 227
G PR P S G PPP P PG GPP P P G G
Sbjct: 292 GMTPRPPPPPSS--GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG 339
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/97 (23%), Positives = 26/97 (26%), Gaps = 1/97 (1%)
Frame = +1
Query: 556 PXAAXPXPXGLAPXKXGXPXXPPXTXXXPXPPPRGPPV-XXXDRPXXPXXRKKXXXXXXX 732
P + P P + P P PP PPP PP P P
Sbjct: 277 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 336
Query: 733 XXXXXXXXPAGXXXXXXPGXGGTPXXXPPXXXTXPPG 843
P P GG P PP + PG
Sbjct: 337 PPGMGGMPPPPPPGMRYP--GGMPPPPPPRYPSAGPG 371
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 325 LPPPXPXXPGXAGPPXXPSGSXSXXPP 245
+PPP P PG P P S PP
Sbjct: 283 MPPPMPPTPGMTPRPPPPPSSGMWPPP 309
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +3
Query: 228 PXKPXXGGXXXXLPEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P K GG P G G P PG G GG GPP P P
Sbjct: 244 PGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGGY-GVGPPGPPGPSGRPGAP 294
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Frame = -2
Query: 364 PRGGGPSSXXXGXLPPP----XPXXPGXAGPPXXPSGSXSXXPPXXG 236
P G P G PPP P P PP +GS PP G
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 305
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = -2
Query: 364 PRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPPXXG 236
P G P G PPP P PP + S PP G
Sbjct: 276 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 318
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Frame = -2
Query: 364 PRGGGPSSXXXGXLPPP----XPXXPGXAGPPXXPSGSXSXXPPXXG 236
P G P G PPP P P PP +GS PP G
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 326
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = -2
Query: 364 PRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPPXXG 236
P G P G PPP P PP + S PP G
Sbjct: 297 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 339
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Frame = -2
Query: 364 PRGGGPSSXXXGXLPPP----XPXXPGXAGPPXXPSGSXSXXPPXXG 236
P G P G PPP P P PP +GS PP G
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 311
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = -2
Query: 364 PRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPPXXG 236
P G P G PPP P PP + S PP G
Sbjct: 282 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 324
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 379 PXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPP 281
P G P G P G PP P PG GPP
Sbjct: 792 PPGMRPPPGAPGGGG-GMYPPLIPTRPGPGGPP 823
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -2
Query: 364 PRGGGPSSXXXGXLPPPX-PXXPGXAGPPXXPSGSXSXXPP 245
PRGG + G PPP P G PP P+ PP
Sbjct: 783 PRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPP 823
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPX--PXXPGXAGPPXXPSGSXSXXPPXXGXXG 227
GP G GGP P P PG GPP P S P G G
Sbjct: 170 GPPGHDGPNGGPGQPGQPGPHGPNGHPGKPGSQGPPGPPGHSDEPKPGQPGQPG 223
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -2
Query: 358 GGGPSSXXXGXLPPPXPXXP-GXAGPPXXPSGSXSXXPP 245
G P S PPP P P G G P P S PP
Sbjct: 131 GKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPP 169
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 275 GXGRAGXAGXXGXXGXEXPPXXXRRPPPPXXXPXRAP 385
G G AG G G P PPPP P AP
Sbjct: 280 GGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAP 316
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 275 GXGRAGXAGXXGXXGXEXPPXXXRRPPPPXXXPXRAP 385
G G AG G G P PPPP P AP
Sbjct: 280 GGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAP 316
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.8
Identities = 30/132 (22%), Positives = 32/132 (24%), Gaps = 6/132 (4%)
Frame = +1
Query: 571 PXPXGLAPXKXGXPXXPPXTXXXP--XPPPRGPPVXXXD--RPXXPXXRKKXXXXXXXXX 738
P G P + P PP P P P GPP D P P +
Sbjct: 126 PGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGP 185
Query: 739 XXXXXXPAGXXXXXXPGXGGTPXXXPP--XXXTXPPGGKNXXXPXAXKNXXGPAPXXXXR 912
P PG G P P PPG P G
Sbjct: 186 KGPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQP 245
Query: 913 XPXXPXXPXXXP 948
P P P P
Sbjct: 246 GPKGPNGPDGQP 257
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 267 PEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P G G P PG G P + PP P GP
Sbjct: 191 PPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGP 229
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 379 PXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPP 281
P G P G P G PP P PG GPP
Sbjct: 792 PPGMRPPPGAPGGGG-GMYPPLIPTRPGPGGPP 823
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -2
Query: 364 PRGGGPSSXXXGXLPPPX-PXXPGXAGPPXXPSGSXSXXPP 245
PRGG + G PPP P G PP P+ PP
Sbjct: 783 PRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPP 823
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.8
Identities = 30/132 (22%), Positives = 32/132 (24%), Gaps = 6/132 (4%)
Frame = +1
Query: 571 PXPXGLAPXKXGXPXXPPXTXXXP--XPPPRGPPVXXXD--RPXXPXXRKKXXXXXXXXX 738
P G P + P PP P P P GPP D P P +
Sbjct: 126 PGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGP 185
Query: 739 XXXXXXPAGXXXXXXPGXGGTPXXXPP--XXXTXPPGGKNXXXPXAXKNXXGPAPXXXXR 912
P PG G P P PPG P G
Sbjct: 186 KGPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQP 245
Query: 913 XPXXPXXPXXXP 948
P P P P
Sbjct: 246 GPKGPNGPDGQP 257
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 267 PEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P G G P PG G P + PP P GP
Sbjct: 191 PPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGP 229
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 270 EGXXGGPAXPGXXGXGGGXXPXXXDDGPPPR 362
+G GGP PG G GG D PPPR
Sbjct: 305 DGGAGGPGQPGQDGGSGG--SGACDHCPPPR 333
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPPXXGXXG 227
GP G G P G + PP P PG AG P P P G G
Sbjct: 162 GPKGPDAAPGEPGPK--GPIGPPGP--PGQAGAPGEPGSPAKSEPAVPGPPG 209
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXX-PGXAGPPXXPSGSXSXXPPXXGXXG 227
GP G P G ++ G PP P PG AGPP + P G G
Sbjct: 162 GPPG--PEGPNGTAGNKGPAGPPGPGGKPGPAGPPGENGRNGEPQPGSPGEPG 212
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +3
Query: 267 PEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P G G P PG G G P +G PP P GP
Sbjct: 196 PSGPQGAPGVPGEKGPTG--EPGKVINGAPPGPPGPPGP 232
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +3
Query: 213 PFXXXPXKPXXGGXXXXLPEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P P KP G P G G P PG G G P PRG P GP
Sbjct: 143 PTTPPPCKPCPQGPPG--PPGPPGAPGDPGEAGTPGRPGTDATPGLPGPRG--PPGP 195
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = +1
Query: 571 PXPXGLAPXKXGXPXXPPXTXXXPXPP---PRGPPVXXXDRPXXP 696
P P + P P PP P PP P GPP RP P
Sbjct: 227 PSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGP 271
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 308 GXXGXEXPPXXXRRPPPPXXXPXRAPXXTRTPPXKK 415
G G PP RRPP P P R P PP ++
Sbjct: 245 GPPGPPGPPT--RRPPGPPGPPTRRPPGPPGPPTRR 278
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPP 281
GP G G P + LP P P PG GPP
Sbjct: 198 GPKGPNGEPGAPGTPGGNALPGP-PGPPGPQGPP 230
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 267 PEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P G G P PG G G GP P G P GP
Sbjct: 145 PPGPAGTPGAPGAPGNAGAPGQDSFGGGPGPAG--PTGP 181
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 267 PEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P+G G P PG G G P P G P GP
Sbjct: 174 PQGPSGPPGPPGQPGQPGQRGPPGEPGALLPGGDAPPGP 212
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +3
Query: 213 PFXXXPXKPXXGGXXXXLPEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P P KP G P G G P PG G G P PRG P GP
Sbjct: 143 PTTPPPCKPCPQGPPG--PPGPPGAPGDPGEAGTPGRPGTDATPGLPGPRG--PPGP 195
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPPXXGXXGXXXKG 212
GP G G + G PP P PG AG P P G+ P G KG
Sbjct: 232 GPAGPPGPDGASPTAAPGAAGPPGP--PGPAGAP-GPDGNPGTAGPPGKAGGEGEKG 285
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 273 GXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
G G P PG G G +GP P G P GP
Sbjct: 137 GPAGAPGAPGPQGPSGAPGQDAVGEGPGPAG--PQGP 171
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +3
Query: 267 PEGXXGGPAXPGXXGXGGGXXPXXXDDGP 353
P+G GGP PG G G P P
Sbjct: 209 PQGPAGGPGQPGQSGGAGAPGPAGAPGAP 237
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPPXXGXXGXXXKG 212
GP G G + G PP P PG AG P P G+ P G KG
Sbjct: 231 GPAGPPGPDGASPTAAPGAAGPPGP--PGPAGAP-GPDGNPGTAGPPGKAGGEGEKG 284
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +3
Query: 213 PFXXXPXKPXXGGXXXXLP-EGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P P KP G +G G P PG G GGG P P+G P GP
Sbjct: 149 PVTVPPCKPCPPGPAGEPGHDGAPGAPGKPGAPGVGGG---SGAPGAPGPKG-APGGP 202
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +3
Query: 228 PXKPXXGGXXXXLPEGXXGGPAXPGXXGXGG-GXXPXXXDDGPPPRGXXPXGP 383
P +P P+G G P PG G G P PP P GP
Sbjct: 141 PCEPITPPPCKPCPDGPAGPPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPKGP 193
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGS 263
GP G G P S L P PG GPP P+G+
Sbjct: 153 GPPGVPGATGNPGSLGESSLGAGSPGPPGGVGPP-GPNGT 191
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPPXXG 236
GP G P G G L PP P PG GP P PP G
Sbjct: 143 GPPG--PAGPPGPDGNKGPLGPPGP--PGPEGPNGEPGNKGPAGPPGPG 187
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXX-PGXAGPPXXPSGSXSXXPPXXGXXG 227
GP G G P + G PP P PG AGPP + P G G
Sbjct: 164 GPPGPEGPNGEPGNK--GPAGPPGPGGKPGPAGPPGENGNNGEPQPGAPGEPG 214
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 556 PXAAXPXPXGLAPXKXGXPXXPPXTXXXPXPPPRGPP 666
P P P P K P PP P P P PP
Sbjct: 74 PLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPP 110
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 556 PXAAXPXPXGLAPXKXGXPXXPPXTXXXPXPPPRGPP 666
P P P P K P PP P P P PP
Sbjct: 296 PLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPP 332
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +3
Query: 246 GGXXXXLPEGXXGGPAXPGXXGXGGGXX-PXXXDDGPPPRGXXPXGP 383
G P G G P G G G P DGP P P GP
Sbjct: 148 GSECVKCPAGPPGAPGPNGPPGYEGQMGVPGLPGDGPTPGSPGPPGP 194
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Frame = +3
Query: 267 PEGXXGGPAXPGXXGXGGGXXPXXXDDGP--PPRGXXPXGP 383
P G GGP PG GG P P P P GP
Sbjct: 182 PPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGP 222
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Frame = +3
Query: 267 PEGXXGGPAXPGXXGXGGGXXPXXXDDGP--PPRGXXPXGP 383
P+G GGP PG G G P P P P P
Sbjct: 209 PQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPGNAGTPGTP 249
>Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical
protein E03G2.4 protein.
Length = 333
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 267 PEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
PEG G P PG G G +GPP + P P
Sbjct: 232 PEGRPGIPGLPGGKGIPGKLIEVAGLEGPPGQSGLPGMP 270
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -2
Query: 373 GXXPRGGGPSSXXXGXLPPPXPXXP-GXAGPPXXPSG 266
G P G P G PPP P P G A PP P+G
Sbjct: 34 GPPPACGNPCGGGFG--PPPPPFGPVGYALPPPPPNG 68
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXP-GXAGPPXXPSGSXSXXPPXXG 236
GP G + G P+ G PP P P G AG P P S P G
Sbjct: 149 GPKGNNGQPGAPAQS--GGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRG 196
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXP-GXAGPPXXPSGSXSXXPPXXG 236
GP G + G P+ G PP P P G AG P P S P G
Sbjct: 149 GPKGNNGQPGAPAQS--GGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRG 196
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +2
Query: 275 GXGRAGXAGXXGXXGXEXPPXXXRRPPPPXXXPXRAPXXTRTPPXKKENXP 427
G G G AG G G E PP PPP AP P E P
Sbjct: 20 GGGGGGEAGYSGGAGVEAPP------PPPPADAAPAPAPEPAPAPAPEAVP 64
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 267 PEGXXGGPAXPGXXGXGGGXXPXXXDDGPPPRGXXPXGP 383
P G G P PG G G P D P G P GP
Sbjct: 168 PPGPNGHPGQPGRPGPAGPAGPEGKDGPVGPHG--PAGP 204
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 323 EXPPXXXRRPPPPXXXPXRAPXXTRTPP 406
E PP +R PPP P + P R PP
Sbjct: 972 EAPPIP-KRNPPPLGAPPKVPEGARAPP 998
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 665 GGPRGGGXGXXXVXGGXXGXPXXWGAXPXGXGXAAXG 555
GGP GGG G GG P G G AA G
Sbjct: 25 GGPAGGGGGNKSAGGGGAPPPGVSCYLGAGAGGAASG 61
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = -1
Query: 665 GGPRGGGXGXXXVXGG---XXGXPXXWGAXPXGXGXAAXGLXF 546
GGP GGG G V GG G GA G G A F
Sbjct: 25 GGPAGGGGGASKVGGGAAPPPGTSVYMGAGGGGGGGGAQSAYF 67
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -2
Query: 382 GPXGXXPRGGGPSSXXXGXLPPPXPXXPGXAGPPXXPSGSXSXXPP 245
GP G GGP G P P PG AGP P P
Sbjct: 172 GPPGPPGGPGGPGEGGDGGRPG-NPGRPGPAGPRGEPGTEYKPGQP 216
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 323 EXPPXXXRRPPPPXXXPXRAPXXTRTPP 406
E PP +R PPP P + P R PP
Sbjct: 972 EAPPIP-KRNPPPLGAPPKVPEGARAPP 998
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 323 EXPPXXXRRPPPPXXXPXRAPXXTRTPP 406
E PP +R PPP P + P R PP
Sbjct: 972 EAPPIP-KRNPPPLGAPPKVPEGARAPP 998
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +3
Query: 570 PPXPGXGXPXXRXXRXPPXXXXPXXPPXPRAPGXXXRPXXXARXPQK 710
PP P P R PP P PP P+ P R P +
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPR 185
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 331 GXLPPPXPXXPGXAGPPXXPSGSXSXXPPXXG 236
G PPP G A PP P G+ PP G
Sbjct: 38 GAPPPPVGAGVGYAPPPPRPYGATYAPPPPMG 69
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -1
Query: 704 RXXGXXGRSXXXTGGPRGGGXGXXXVXGGXXGXPXXWGAXPXGXGXAAXG 555
R G GR G RGGG G GG G WG G G G
Sbjct: 54 RYGGWGGRG----GWGRGGGRGYGGRGGGWGGRGGGWGRGGGGRGFYGGG 99
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 358 GGGPSSXXXGXLPPPXPXXPGXAGPPXXPS 269
GGGP G PP P G GP P+
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPA 644
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 358 GGGPSSXXXGXLPPPXPXXPGXAGPPXXPS 269
GGGP G PP P G GP P+
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPA 644
>AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen protein
104 protein.
Length = 281
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 322 PPPXPXXPGXAGPPXXPSGSXSXXPP 245
PP P PG AGPP P + P
Sbjct: 137 PPGAPGFPGPAGPPGAPGDKGNDGAP 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.144 0.493
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,826,895
Number of Sequences: 27780
Number of extensions: 188223
Number of successful extensions: 3421
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2873
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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