Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_A12
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 77 1e-14
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 71 8e-13
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 71 8e-13
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 70 3e-12
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 69 3e-12
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 69 3e-12
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 69 3e-12
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 69 3e-12
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 69 3e-12
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 68 8e-12
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 68 8e-12
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 68 8e-12
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 68 8e-12
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 68 1e-11
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 64 2e-10
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 64 2e-10
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 64 2e-10
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 60 2e-09
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 59 4e-09
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 59 4e-09
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 59 4e-09
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 59 5e-09
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 59 5e-09
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 58 6e-09
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 58 8e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 58 8e-09
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 57 2e-08
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 57 2e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 57 2e-08
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 56 3e-08
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 54 2e-07
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 51 1e-06
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 51 1e-06
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 50 2e-06
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 48 9e-06
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 48 9e-06
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 46 4e-05
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 42 6e-04
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 42 6e-04
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 42 8e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 42 8e-04
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 40 0.003
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 39 0.004
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 37 0.017
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 36 0.051
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 34 0.12
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 34 0.12
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 34 0.12
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.36
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 31 0.83
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF025456-3|AAB70956.1| 440|Caenorhabditis elegans Hypothetical ... 28 7.7
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 77.4 bits (182), Expect = 1e-14
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 9/113 (7%)
Frame = +3
Query: 438 FRNEHGIKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLED 617
FR + I G +P L+++ + P + V + GY EPTP+QRQA+ L++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEA----GFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQN 338
Query: 618 RQIVACAPTGSGKTAAFIVPLLHTLGT--------HQG-GPRALILCPTRELA 749
R ++ A TGSGKTAAF++PLL + + H+ GP A+I+ PTRELA
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELA 391
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 71.3 bits (167), Expect = 8e-13
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Frame = +3
Query: 561 GYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQ-GGPRALILCPT 737
G+++PTP+QR+ + C+++ + +VA + TGSGKTAAF++P+L L G RAL++ PT
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPT 102
Query: 738 RELA 749
RELA
Sbjct: 103 RELA 106
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 71.3 bits (167), Expect = 8e-13
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Frame = +3
Query: 561 GYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQ-GGPRALILCPT 737
G+++PTP+QR+ + C+++ + +VA + TGSGKTAAF++P+L L G RAL++ PT
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPT 102
Query: 738 RELA 749
RELA
Sbjct: 103 RELA 106
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 69.7 bits (163), Expect = 3e-12
Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 16/114 (14%)
Frame = +3
Query: 456 IKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVAC 635
++A G +P + FSDL++ + + + + GY PTPVQ+ ++ + R +++C
Sbjct: 154 VEATGDDVPQPISLFSDLSLH----EWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSC 209
Query: 636 APTGSGKTAAFIVPL-----------LHTLGTHQGG-----PRALILCPTRELA 749
A TGSGKTAAF+VPL +H T GG P AL+L PTREL+
Sbjct: 210 AQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELS 263
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 69.3 bits (162), Expect = 3e-12
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 9/95 (9%)
Frame = +3
Query: 492 KDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFI 671
K FSD ++PQ++ V + GY+ TP+Q+ + + + + I+ACA TGSGKTAAF+
Sbjct: 298 KSFSDS----DIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFL 353
Query: 672 VPLLHTLGTH-------QGG--PRALILCPTRELA 749
+P++ L +GG PR +IL PTRELA
Sbjct: 354 LPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELA 388
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 69.3 bits (162), Expect = 3e-12
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 9/95 (9%)
Frame = +3
Query: 492 KDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFI 671
K FSD ++PQ++ V + GY+ TP+Q+ + + + + I+ACA TGSGKTAAF+
Sbjct: 298 KSFSDS----DIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFL 353
Query: 672 VPLLHTLGTH-------QGG--PRALILCPTRELA 749
+P++ L +GG PR +IL PTRELA
Sbjct: 354 LPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELA 388
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 69.3 bits (162), Expect = 3e-12
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 15/113 (13%)
Frame = +3
Query: 456 IKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVAC 635
++ G +P A++ F++ A+++ V + GYS+PTPVQ+ ++ +L +R +++C
Sbjct: 127 VEVSGDSVPAAIEHFNEA----GFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSC 182
Query: 636 APTGSGKTAAFIVPLLH---------------TLGTHQGGPRALILCPTRELA 749
A TGSGKTAAF++P++ T G P AL+L PTRELA
Sbjct: 183 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 235
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 69.3 bits (162), Expect = 3e-12
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 15/113 (13%)
Frame = +3
Query: 456 IKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVAC 635
++ G +P A++ F++ A+++ V + GYS+PTPVQ+ ++ +L +R +++C
Sbjct: 111 VEVSGDSVPAAIEHFNEA----GFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSC 166
Query: 636 APTGSGKTAAFIVPLLH---------------TLGTHQGGPRALILCPTRELA 749
A TGSGKTAAF++P++ T G P AL+L PTRELA
Sbjct: 167 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 219
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 69.3 bits (162), Expect = 3e-12
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 15/113 (13%)
Frame = +3
Query: 456 IKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVAC 635
++ G +P A++ F++ A+++ V + GYS+PTPVQ+ ++ +L +R +++C
Sbjct: 108 VEVSGDSVPAAIEHFNEA----GFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSC 163
Query: 636 APTGSGKTAAFIVPLLH---------------TLGTHQGGPRALILCPTRELA 749
A TGSGKTAAF++P++ T G P AL+L PTRELA
Sbjct: 164 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 216
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 68.1 bits (159), Expect = 8e-12
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Frame = +3
Query: 522 NVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------ 683
N+ + + V GYS+ TP+Q+ A+ + + I+ACA TGSGKTAAF++P++
Sbjct: 347 NLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDD 406
Query: 684 HTLGT-HQGG--PRALILCPTRELAHXNIQRGPATECSTQLXVTVV 812
+ L T +GG PR +IL PTRELA G T + + V
Sbjct: 407 NNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPV 452
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 68.1 bits (159), Expect = 8e-12
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Frame = +3
Query: 522 NVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------ 683
N+ + + V GYS+ TP+Q+ A+ + + I+ACA TGSGKTAAF++P++
Sbjct: 347 NLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDD 406
Query: 684 HTLGT-HQGG--PRALILCPTRELAHXNIQRGPATECSTQLXVTVV 812
+ L T +GG PR +IL PTRELA G T + + V
Sbjct: 407 NNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPV 452
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 68.1 bits (159), Expect = 8e-12
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Frame = +3
Query: 522 NVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------ 683
N+ + + V GYS+ TP+Q+ A+ + + I+ACA TGSGKTAAF++P++
Sbjct: 347 NLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDD 406
Query: 684 HTLGT-HQGG--PRALILCPTRELAHXNIQRGPATECSTQLXVTVV 812
+ L T +GG PR +IL PTRELA G T + + V
Sbjct: 407 NNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPV 452
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 68.1 bits (159), Expect = 8e-12
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = +3
Query: 522 NVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTH 701
N+ + ++ + GYS+PTP+Q+ + L + I ACA TG+GKTAAF++P+L +
Sbjct: 154 NLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYR 213
Query: 702 QGG---PRALILCPTRELA 749
G R L+L PTRELA
Sbjct: 214 PKGASCTRVLVLVPTRELA 232
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 67.7 bits (158), Expect = 1e-11
Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Frame = +3
Query: 519 YNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQ-IVACAPTGSGKTAAFIVPLL---- 683
Y +P +++ + Q G+SEPT +Q + + DRQ ++ A TGSGKT AF +PL+
Sbjct: 160 YFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLL 219
Query: 684 -------HTLGTHQGGPRALILCPTRELAHXNIQRGPATECSTQLXVT-VVKNLKESK 833
T T GPRALI+ PTREL ++ A +TQL T +V L + K
Sbjct: 220 ESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVK 277
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 63.7 bits (148), Expect = 2e-10
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Frame = +3
Query: 522 NVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------ 683
N+ + + V GY++ TP+Q+ + + + I+ACA TGSGKTAAF++P++
Sbjct: 558 NLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDE 617
Query: 684 HTLGT-HQGG--PRALILCPTRELAHXNIQRGPATECSTQLXVTVV 812
+ L T +GG PR +IL PTREL G T + + V
Sbjct: 618 NDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPV 663
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 63.7 bits (148), Expect = 2e-10
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Frame = +3
Query: 522 NVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------ 683
N+ + + V GY++ TP+Q+ + + + I+ACA TGSGKTAAF++P++
Sbjct: 558 NLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDE 617
Query: 684 HTLGT-HQGG--PRALILCPTRELAHXNIQRGPATECSTQLXVTVV 812
+ L T +GG PR +IL PTREL G T + + V
Sbjct: 618 NDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPV 663
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 63.7 bits (148), Expect = 2e-10
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Frame = +3
Query: 522 NVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------ 683
N+ + + V GY++ TP+Q+ + + + I+ACA TGSGKTAAF++P++
Sbjct: 558 NLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDE 617
Query: 684 HTLGT-HQGG--PRALILCPTRELAHXNIQRGPATECSTQLXVTVV 812
+ L T +GG PR +IL PTREL G T + + V
Sbjct: 618 NDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPV 663
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/86 (38%), Positives = 50/86 (58%)
Frame = +3
Query: 492 KDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFI 671
K F++L V Q L D + G+ +P+ +Q+ A+ L+ + ++ A TGSGKT AF
Sbjct: 44 KSFAEL----GVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFA 99
Query: 672 VPLLHTLGTHQGGPRALILCPTRELA 749
+P+L +L H L+L PTRELA
Sbjct: 100 IPVLQSLLDHPQAFFCLVLTPTRELA 125
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 60.5 bits (140), Expect = 2e-09
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Frame = +3
Query: 426 EENRFRNE-HGIKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMA 602
E +R E I G P +K ++ V +++ + + YS+PT +Q QA+
Sbjct: 281 EVKAYREELDSITVKGIDCPKPIKTWAQCGVNLK----MMNVLKKFEYSKPTSIQAQAIP 336
Query: 603 CMLEDRQIVACAPTGSGKTAAFIVPLL-HTLGTHQ----GGPRALILCPTRELA 749
++ R ++ A TGSGKT AF++P+ H L + GP A+IL PTRELA
Sbjct: 337 SIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELA 390
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 59.3 bits (137), Expect = 4e-09
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Frame = +3
Query: 435 RFRNEHGIKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLE 614
R +N ++ G P + F+ ++ + L++ + + Y +PTP+Q A+ L
Sbjct: 246 RLQNTMNLRVGGLKPPRPVCSFA----HFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALS 301
Query: 615 DRQIVACAPTGSGKTAAFIVP-LLHTLGTHQ----GGPRALILCPTRELA 749
R ++ A TGSGKTAA++ P ++H + GP A+I+ PTRELA
Sbjct: 302 GRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELA 351
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 59.3 bits (137), Expect = 4e-09
Identities = 27/63 (42%), Positives = 44/63 (69%)
Frame = +3
Query: 561 GYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRALILCPTR 740
G+ +P+ +Q++A+ +L+ R ++A A +G+GKTA F + +L +L T +ALIL PTR
Sbjct: 45 GFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTR 104
Query: 741 ELA 749
ELA
Sbjct: 105 ELA 107
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 59.3 bits (137), Expect = 4e-09
Identities = 27/63 (42%), Positives = 44/63 (69%)
Frame = +3
Query: 561 GYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRALILCPTR 740
G+ +P+ +Q++A+ +L+ R ++A A +G+GKTA F + +L +L T +ALIL PTR
Sbjct: 45 GFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTR 104
Query: 741 ELA 749
ELA
Sbjct: 105 ELA 107
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 58.8 bits (136), Expect = 5e-09
Identities = 30/58 (51%), Positives = 36/58 (62%)
Frame = +3
Query: 576 TPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRALILCPTRELA 749
TPVQ + +LE I+ CA TG+GKT AF +P+L L G ALIL PTRELA
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELA 170
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 58.8 bits (136), Expect = 5e-09
Identities = 30/58 (51%), Positives = 36/58 (62%)
Frame = +3
Query: 576 TPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRALILCPTRELA 749
TPVQ + +LE I+ CA TG+GKT AF +P+L L G ALIL PTRELA
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELA 170
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 58.4 bits (135), Expect = 6e-09
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Frame = +3
Query: 420 QEEENRFRNEHGIKAVGRHIPPALKDFSDLTVRYNVPQALVDTVT-QCGYSEPTPVQRQA 596
QE+ R GI G HIPP + F ++ P++L++ + Q G PT +Q Q
Sbjct: 165 QEDYEIQRKRLGISCEGDHIPPPIGSFLEM----KFPKSLLEFMQKQKGIVTPTAIQIQG 220
Query: 597 MACMLEDRQIVACAPTGSGKTAAFIVPL--------LHTLGTHQGGPRALILCPTRELA 749
+ L R ++ A TGSGKT F++PL + GP LI+ P+RELA
Sbjct: 221 IPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELA 279
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 58.0 bits (134), Expect = 8e-09
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
Frame = +3
Query: 525 VPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------- 683
+PQ L D + + + PTP+QR + ++ +VACA TGSGKT AF++P +
Sbjct: 743 LPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEF 802
Query: 684 ---HTLGTHQGGPRALILCPTRELAH 752
+ + PR LI+ PTREL +
Sbjct: 803 EKDRDVTDEKPSPRLLIVAPTRELVN 828
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 58.0 bits (134), Expect = 8e-09
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
Frame = +3
Query: 525 VPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL------- 683
+PQ L D + + + PTP+QR + ++ +VACA TGSGKT AF++P +
Sbjct: 743 LPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEF 802
Query: 684 ---HTLGTHQGGPRALILCPTRELAH 752
+ + PR LI+ PTREL +
Sbjct: 803 EKDRDVTDEKPSPRLLIVAPTRELVN 828
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 56.8 bits (131), Expect = 2e-08
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Frame = +3
Query: 441 RNEHGIKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDR 620
R + I G H+P + FSD ++ +L++ +++ +P+P+Q Q++ M E R
Sbjct: 109 RRTNRIFTWGDHLPNIILRFSDSSMS----PSLLNRLSENSIRQPSPIQMQSIPFMTERR 164
Query: 621 QIVACAPTGSGKTAAFIVPLLHTL----------GTHQGGPRALILCPTRELA 749
++A APTGSGKT AF +P++ + ++ A++L PTRELA
Sbjct: 165 NVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELA 217
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 56.8 bits (131), Expect = 2e-08
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 13/103 (12%)
Frame = +3
Query: 564 YSEPTPVQRQAMACMLEDRQ-IVACAPTGSGKTAAFIVPLL-----------HTLGTHQG 707
+SEPT +Q + + DRQ ++ A TGSGKT AF +PL+ T T
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 708 GPRALILCPTRELAHXNIQRGPATECSTQLXVT-VVKNLKESK 833
GPRALI+ PTREL ++ A +TQL T +V L + K
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVK 110
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Frame = +3
Query: 483 PALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTA 662
P K F+D + + + ++ ++ + G+ + VQ ++ LE++ I+ A TGSGKT
Sbjct: 86 PEHKTFAD----FGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTG 141
Query: 663 AFIVPLLHTL----GTHQG--GPRALILCPTREL 746
AF++PL+ L T+ G GP A+I+ PT+EL
Sbjct: 142 AFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKEL 175
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +3
Query: 498 FSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVP 677
F D + + + L D Y++PT +QR +A L +V A TGSGKT A ++P
Sbjct: 78 FEDFPLSWRTLEGLKDN----DYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP 133
Query: 678 LLHTLGTHQGGP----RALILCPTRELA 749
+L L + P ALI+ PTRELA
Sbjct: 134 VLEALWRAKWSPDYGLGALIISPTRELA 161
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Frame = +3
Query: 537 LVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVP---LLHTLGTHQ- 704
L+ V G++ T +Q +++ +LE + ++A A TGSGKT AF++P LLH L Q
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 705 GGPRALILCPTRELA 749
G +I+ PTREL+
Sbjct: 139 NGTGVIIVSPTRELS 153
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 53.2 bits (122), Expect = 2e-07
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Frame = +3
Query: 420 QEEENRFRNEHGIKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAM 599
Q E +++ + + + GR +P + +F++ + + + L + +PT +Q +
Sbjct: 106 QYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHELLYGK-----FQKPTVIQSISW 160
Query: 600 ACMLEDRQIVACAPTGSGKTAAFIVP-LLH-TLGTHQ---GGPRALILCPTRELA 749
+ R I++ A TGSGKT AF++P L+H T H+ GP L+L PTRELA
Sbjct: 161 PIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELA 215
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/94 (29%), Positives = 52/94 (55%)
Frame = +3
Query: 561 GYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRALILCPTR 740
G+ +P+ +Q++A+ + ++A A +G+GKTA F V +L + +AL++ PTR
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTR 107
Query: 741 ELAHXNIQRGPATECSTQLXVTVVKNLKESKVKD 842
ELA IQ+ + L V ++ + + V+D
Sbjct: 108 ELAQ-QIQK-VMSALGEYLNVNILPCIGGTSVRD 139
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/94 (29%), Positives = 52/94 (55%)
Frame = +3
Query: 561 GYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRALILCPTR 740
G+ +P+ +Q++A+ + ++A A +G+GKTA F V +L + +AL++ PTR
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTR 107
Query: 741 ELAHXNIQRGPATECSTQLXVTVVKNLKESKVKD 842
ELA IQ+ + L V ++ + + V+D
Sbjct: 108 ELAQ-QIQK-VMSALGEYLNVNILPCIGGTSVRD 139
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 50.4 bits (115), Expect = 2e-06
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Frame = +3
Query: 438 FRNEHGIKAVGRHIPPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLED 617
FR E +K IPP + F + +++ + + G+ +P+P+Q Q +L
Sbjct: 70 FREESTVK-----IPPPVNSFEQA---FGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSG 121
Query: 618 RQIVACAPTGSGKTAAFIVP-LLH---TLGTHQ-------GGPRALILCPTRELA 749
+ + + TGSGKT AF++P LLH L ++ P L+L PTRELA
Sbjct: 122 QDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELA 176
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/63 (33%), Positives = 39/63 (61%)
Frame = +3
Query: 561 GYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPRALILCPTR 740
G+ +P+P+Q ++ L + I+A A G+GKT A+ +P++ + +A+++ PTR
Sbjct: 62 GWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTR 121
Query: 741 ELA 749
ELA
Sbjct: 122 ELA 124
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 48.0 bits (109), Expect = 9e-06
Identities = 26/84 (30%), Positives = 42/84 (50%)
Frame = +3
Query: 498 FSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVP 677
F D ++ + +A+ D CG+ P+ VQ + + + +V A +G GKTA F++
Sbjct: 43 FRDFLLKPEILRAIGD----CGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVIT 98
Query: 678 LLHTLGTHQGGPRALILCPTRELA 749
L L G + +C TRELA
Sbjct: 99 TLQQLEPVDGEVSVVCMCHTRELA 122
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 48.0 bits (109), Expect = 9e-06
Identities = 26/84 (30%), Positives = 42/84 (50%)
Frame = +3
Query: 498 FSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVP 677
F D ++ + +A+ D CG+ P+ VQ + + + +V A +G GKTA F++
Sbjct: 43 FRDFLLKPEILRAIGD----CGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVIT 98
Query: 678 LLHTLGTHQGGPRALILCPTRELA 749
L L G + +C TRELA
Sbjct: 99 TLQQLEPVDGEVSVVCMCHTRELA 122
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 48.0 bits (109), Expect = 9e-06
Identities = 26/84 (30%), Positives = 42/84 (50%)
Frame = +3
Query: 498 FSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVP 677
F D ++ + +A+ D CG+ P+ VQ + + + +V A +G GKTA F++
Sbjct: 42 FRDFLLKPEILRAIGD----CGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVIT 97
Query: 678 LLHTLGTHQGGPRALILCPTRELA 749
L L G + +C TRELA
Sbjct: 98 TLQQLEPVDGEVSVVCMCHTRELA 121
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 46.0 bits (104), Expect = 4e-05
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = +3
Query: 486 ALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLED--RQIVACAPTGSGKT 659
++ F +L ++ V +AL DT+ + PT +Q A+ +L + ++A A +G+GKT
Sbjct: 207 SISSFRELRLKPEVLKAL-DTMN---FQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKT 262
Query: 660 AAFIVPLLHTLGTHQGGPRALILCPTRELA 749
AAF++ +L + + P+ + L PT ELA
Sbjct: 263 AAFVLTMLCRIDVNLMCPQCICLAPTLELA 292
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 46.0 bits (104), Expect = 4e-05
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = +3
Query: 486 ALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLED--RQIVACAPTGSGKT 659
++ F +L ++ V +AL DT+ + PT +Q A+ +L + ++A A +G+GKT
Sbjct: 232 SISSFRELRLKPEVLKAL-DTMN---FQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKT 287
Query: 660 AAFIVPLLHTLGTHQGGPRALILCPTRELA 749
AAF++ +L + + P+ + L PT ELA
Sbjct: 288 AAFVLTMLCRIDVNLMCPQCICLAPTLELA 317
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 46.0 bits (104), Expect = 4e-05
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = +3
Query: 486 ALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLED--RQIVACAPTGSGKT 659
++ F +L ++ V +AL DT+ + PT +Q A+ +L + ++A A +G+GKT
Sbjct: 616 SISSFRELRLKPEVLKAL-DTMN---FQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKT 671
Query: 660 AAFIVPLLHTLGTHQGGPRALILCPTRELA 749
AAF++ +L + + P+ + L PT ELA
Sbjct: 672 AAFVLTMLCRIDVNLMCPQCICLAPTLELA 701
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +3
Query: 525 VPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQ 704
+ Q ++ + + P+PVQ +A+ L R ++ A +G+GKT F V + L +
Sbjct: 29 IGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRS 88
Query: 705 GGPRALILCPTRELA 749
+ +I+ PTRE++
Sbjct: 89 SHIQKVIVTPTREIS 103
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +3
Query: 525 VPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQ 704
+ Q ++ + + P+PVQ +A+ L R ++ A +G+GKT F V + L +
Sbjct: 29 IGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRS 88
Query: 705 GGPRALILCPTRELA 749
+ +I+ PTRE++
Sbjct: 89 SHIQKVIVTPTREIS 103
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 41.5 bits (93), Expect = 8e-04
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Frame = +3
Query: 537 LVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTL-------- 692
+++T+ + Y+ +Q + +L+ ++ A T +GKTAAF +P++ +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 693 --GTHQGGPRALILCPTRELA 749
GP ALIL PTRELA
Sbjct: 452 NKARQDDGPLALILAPTRELA 472
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 41.5 bits (93), Expect = 8e-04
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = +3
Query: 564 YSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGGPR---ALILCP 734
Y T VQ + +L +V +PTGSGKT AF++P++ + + P ALIL P
Sbjct: 29 YKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSP 88
Query: 735 TREL 746
+REL
Sbjct: 89 SREL 92
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +3
Query: 480 PPALKDFSDLTVRYNVPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQ-IVACAPTGSGK 656
P L D L + + + G+ P+Q Q + E + ++ CAP GSGK
Sbjct: 1291 PTELLDLQPLPISAVTNKEFQTVFAESGFKVFNPIQTQVFRTVFESNENVIVCAPNGSGK 1350
Query: 657 TA-AFIVPLLHTLGTHQGGPRALILCPTRELA 749
TA A + L H T + +A+ + P ++A
Sbjct: 1351 TAIAELAVLRHFENTPEA--KAVYITPMEDMA 1380
Score = 34.7 bits (76), Expect = 0.089
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 561 GYSEPTPVQRQAMACMLEDRQ-IVACAPTGSGKTAAFIVPLLHTLGTH 701
GY +Q + L ++ ++ CAPTG+GKT ++ +L +G H
Sbjct: 471 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNH 518
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +3
Query: 525 VPQALVDTVTQCGYSEPTPVQRQAMACMLEDRQIVACAPTGSGKTAAFIVPL 680
+P+ L D ++ ++ PT VQ +A+ +L + A TGSGKT AF +P+
Sbjct: 10 IPE-LSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPI 60
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 609 LEDRQIVACAPTGSGKTAAFIVPLLHTLGTHQGG-PRALILCPTREL 746
L R + APTGSGKT +++P+L +G+ +A+IL P + L
Sbjct: 154 LRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTL 200
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 35.5 bits (78), Expect = 0.051
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +3
Query: 477 IPPALKDFSDLTVRYNVP-QALVDTVTQCGYSEP--TPVQRQAMACMLE-DRQIVACAPT 644
+P + K +DL +P + L ++ + Y+ P+Q Q C+ + D+ + APT
Sbjct: 926 LPKSFKSHTDLLDLEPLPIKTLKNSKFEAIYNFDYFNPIQAQVFFCLYKTDKSALIGAPT 985
Query: 645 GSGKTAAFIVPLLHTLGTHQGGPRALILCPTRELAHXNI 761
GSGKT + + L H G + + + P + L +
Sbjct: 986 GSGKTLCAELAMFRLLQDHP-GMKVVYIAPLKSLVRERV 1023
Score = 32.3 bits (70), Expect = 0.47
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 624 IVACAPTGSGKTAAFIVPLLHTLGTHQ 704
++ CAPTG+GKT ++ +L+T+ HQ
Sbjct: 111 LLICAPTGAGKTNIAMLTILNTIHEHQ 137
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 582 VQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL 683
VQ+ ++ + E R +V APTG GKT AF++P +
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 52
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 582 VQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL 683
VQ+ ++ + E R +V APTG GKT AF++P +
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 561 GYSEPTPVQRQAMACMLEDRQ-IVACAPTGSGKTAAFIVPLLHTLGTH 701
GY +Q + L ++ ++ CAPTG+GKT ++ +L +G H
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNH 320
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 582 VQRQAMACMLEDRQIVACAPTGSGKTAAFIVPLL 683
VQ++++ + + R ++ APTG GKT AF++P +
Sbjct: 118 VQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAI 151
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 585 QRQAMACMLEDRQIVACAPTGSGKTAAFIVPLLHTL--GTHQGGP-RALILCP 734
Q + + LE + V APTGSGKT I L + T QG P R ++L P
Sbjct: 375 QEELVQPALEGKNCVIVAPTGSGKTEVAIYAALKHIEERTSQGKPSRVVLLVP 427
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 518 LQCSTGSC*YSHPVWIQ*THSSSTASNGLHVGGPSNSSVRSDRVG*NCRVYRT 676
L C G+C PVW T ++STAS + S + SD R+ T
Sbjct: 87 LFCVKGACSDPSPVWTNCTETTSTASTEFTISSTSLKTSTSDSTSTEPRISTT 139
>Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 399 LRLFPSFSFPAFFYQL*HHQLTPILLPH 316
L L FSFP F Y +H TP++LPH
Sbjct: 3 LLLLLLFSFPVFIYSEVNH-ATPLILPH 29
>Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 399 LRLFPSFSFPAFFYQL*HHQLTPILLPH 316
L L FSFP F Y +H TP++LPH
Sbjct: 3 LLLLLLFSFPVFIYSEVNH-ATPLILPH 29
>AF025456-3|AAB70956.1| 440|Caenorhabditis elegans Hypothetical
protein C46F9.2 protein.
Length = 440
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 423 EEENRFRNEHGIKAVGRHIPPALKDFSDLTVRYNVP 530
+ +N F +H K + R + KDFSDL +N+P
Sbjct: 143 DSDNSFVLKHTFKNISRFVELE-KDFSDLEEHFNIP 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,747,631
Number of Sequences: 27780
Number of extensions: 293160
Number of successful extensions: 788
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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