Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_A07
         (1208 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.          29   2.1  
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.     28   4.5  
AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein pr...    28   4.5  

>BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.
          Length = 673

 Score = 28.7 bits (61), Expect(2) = 2.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 660 PPPPPPXKXXPPP 622
           PPPPPP +  PPP
Sbjct: 75  PPPPPPQQPPPPP 87



 Score = 23.0 bits (47), Expect(2) = 2.1
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 684 GGGXFXXIPPPPPP 643
           G G     PPPPPP
Sbjct: 39  GAGLLAPGPPPPPP 52


>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
          Length = 1112

 Score = 28.3 bits (60), Expect(2) = 4.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 663 IPPPPPPXKXXPPP 622
           +PPPPPP    PPP
Sbjct: 571 MPPPPPPPPPPPPP 584



 Score = 22.2 bits (45), Expect(2) = 4.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 684 GGGXFXXIPPPPPP 643
           G      +PPPPPP
Sbjct: 538 GAASSGPLPPPPPP 551


>AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein
           protein.
          Length = 1009

 Score = 28.3 bits (60), Expect(2) = 4.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 663 IPPPPPPXKXXPPP 622
           +PPPPPP    PPP
Sbjct: 468 MPPPPPPPPPPPPP 481



 Score = 22.2 bits (45), Expect(2) = 4.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 684 GGGXFXXIPPPPPP 643
           G      +PPPPPP
Sbjct: 435 GAASSGPLPPPPPP 448


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,206,771
Number of Sequences: 237096
Number of extensions: 1118749
Number of successful extensions: 14508
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10781
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17064331300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)