Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_A07
         (1208 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77662-15|CAI79240.1|  255|Caenorhabditis elegans Hypothetical p...    32   0.71 
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    27   1.1  
Z93393-1|CAB07688.1|  497|Caenorhabditis elegans Hypothetical pr...    30   3.8  

>Z77662-15|CAI79240.1|  255|Caenorhabditis elegans Hypothetical
           protein F47B8.14 protein.
          Length = 255

 Score = 32.3 bits (70), Expect = 0.71
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 623 GGGXXFXGGGGGGXXXXXPPP 685
           GGG  + GGGGGG     PPP
Sbjct: 24  GGGGGYSGGGGGGGDAAPPPP 44



 Score = 30.3 bits (65), Expect = 2.9
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +2

Query: 623 GGGXXFXGGGGGGXXXXXPPP 685
           GGG    GGGGGG     PPP
Sbjct: 25  GGGGYSGGGGGGGDAAPPPPP 45



 Score = 29.1 bits (62), Expect = 6.6
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -3

Query: 684 GGGXFXXIPPPPPPXKXXPPP 622
           GGG     PPPPPP    P P
Sbjct: 33  GGGGGDAAPPPPPPADAAPAP 53


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 27.5 bits (58), Expect(2) = 1.1
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 660 PPPPPPXKXXPPP 622
           PPPPPP    PPP
Sbjct: 579 PPPPPPMLGGPPP 591



 Score = 22.6 bits (46), Expect(2) = 1.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 663 IPPPPPP 643
           IPPPPPP
Sbjct: 560 IPPPPPP 566


>Z93393-1|CAB07688.1|  497|Caenorhabditis elegans Hypothetical
           protein Y48E1B.1 protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -3

Query: 663 IPPPPPPXKXXPPPQ 619
           +PPPPPP K  P PQ
Sbjct: 323 LPPPPPPMKLDPSPQ 337



 Score = 29.9 bits (64), Expect = 3.8
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 660 PPPPPPXKXXPPPQ 619
           PPPPPP    PPPQ
Sbjct: 358 PPPPPPPPPPPPPQ 371


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,732,950
Number of Sequences: 27780
Number of extensions: 138808
Number of successful extensions: 2107
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1665
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3328592102
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)