Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_A04
(885 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 36 0.008
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 34 0.023
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 31 0.17
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 31 0.17
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 0.50
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.67
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 29 1.2
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 29 1.2
SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 2.0
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 28 2.0
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 27 2.7
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 3.6
SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyce... 27 3.6
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 4.7
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 27 4.7
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 26 6.2
SPAC23H4.11c |cnl2||centromere localized protein Cnl2|Schizosacc... 26 6.2
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 26 6.2
SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyce... 26 8.2
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 35.9 bits (79), Expect = 0.008
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Frame = +2
Query: 203 IEHHTKEFHKTLEQQFNSLTKSKDAQDF---SKAWXDGSESVLQQLNAFAKSLQGALGDA 373
I+ K LEQ+ +L ++++A++ ++ + D S S +L A AK A DA
Sbjct: 98 IQPDEKTLQDLLEQRQVALREAREAEEELQRARQYNDRSTSEALELEARAKK---AAQDA 154
Query: 374 NGKAKEALEQSRQNIERTAEELRK-AHPDVEKNATALRES 490
A E +++ +IER+A K A + E+ ATALRE+
Sbjct: 155 E-LASERAREAQSSIERSASLREKQAREEAERAATALREA 193
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 34.3 bits (75), Expect = 0.023
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 9/165 (5%)
Frame = +2
Query: 227 HKTLEQQFNSLTKSKDAQDFSKAWXDGSESVLQQLNAFAKSLQGALGDANG---KAKEAL 397
H+T+ +Q + +A + ES L N ++ L ++N K +E +
Sbjct: 625 HQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLEESNKSLIKKQEDV 684
Query: 398 EQSRQNIERTAEELRKAHPDV---EKNATALRESLQ--AAVXNTVQESQKLAKKVSSNVQ 562
+ +NI+ E+LRK+ + + A LRE + T++ + S+ +
Sbjct: 685 DSLEKNIQTLKEDLRKSEEALRFSKLEAKNLREVIDNLKGKHETLEAQRNDLHSSLSDAK 744
Query: 563 ETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAANAKQ-*ASILNSH 694
TN L+ ++ + +D + T V Q++ KQ S++NS+
Sbjct: 745 NTNAILSSELTKSSEDVKRLTANVETLTQDSKAMKQSFTSLVNSY 789
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 31.5 bits (68), Expect = 0.17
Identities = 36/161 (22%), Positives = 62/161 (38%), Gaps = 3/161 (1%)
Frame = +2
Query: 173 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT---KSKDAQDFSKAWXDGSESVLQQLNAFA 343
++ DFFK + ++ H TL ++ NSL+ +K + G + +LN
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLSSFLSTKSTSASENKFHGGLNWLSLKLNLLL 115
Query: 344 KSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALRESLQAAVXNTVQE 523
+ LQG + A S + E V +N + R+ L V ++Q
Sbjct: 116 R-LQGRMNSAR------TNTSMNPYSCDSNENLSTLSSVNQNFNS-RQLLATIVPESIQN 167
Query: 524 SQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKI 646
L + V++ L P + Y KNT + KK+
Sbjct: 168 GCSLLRITKKKVRQRKVSLDP--ISGYLMLDKNTGKAYKKL 206
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 31.5 bits (68), Expect = 0.17
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Frame = +2
Query: 233 TLEQQFNSLTKSKDAQD---FSKAWXDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQ 403
T+E ++SL KSK + F + + + +L N + + L + +A KA+++LEQ
Sbjct: 8 TIELDYDSL-KSKISNFNSIFDRFLQEERKKLLNNKNEYLRQLS-EINEAQKKAEKSLEQ 65
Query: 404 SRQNIERTAEELRKAHPD---VEKNATALRESLQAAVXNTVQESQKL 535
+ + E L K H + E+ + +E L A + + S++L
Sbjct: 66 TEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEEL 112
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 29.9 bits (64), Expect = 0.50
Identities = 17/81 (20%), Positives = 38/81 (46%)
Frame = +2
Query: 332 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALRESLQAAVXN 511
N + ++ AL + KA + LE+ ++ E + EE+ H + T+ + + +
Sbjct: 337 NLVSLAIYEALYEKFLKACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEK 396
Query: 512 TVQESQKLAKKVSSNVQETNE 574
+QE ++ K + Q+ +E
Sbjct: 397 IIQEKSRVDKMIDEYRQKLSE 417
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 29.5 bits (63), Expect = 0.67
Identities = 26/109 (23%), Positives = 47/109 (43%)
Frame = +2
Query: 152 LAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWXDGSESVLQQL 331
L + V R F + +EH+ K+LE+Q + L +SKDA A S+
Sbjct: 193 LKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQSKDASSNLTACNRSGSSLSSNF 251
Query: 332 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATA 478
+ S + +L N K++ +L+ ++ R P+V + +A
Sbjct: 252 YSSRLSKKTSLASLN-KSRASLQHKIMSLSRNIIRRVFHKPEVHLDPSA 299
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 28.7 bits (61), Expect = 1.2
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Frame = +2
Query: 380 KAKEALE---QSRQNIERTAEELRK---AHPD-VEKNATALRESLQAAVXNTVQESQKLA 538
K KE +E Q ++ +ER E LRK + D VE A + + E QKL
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLY 187
Query: 539 KKVSSNVQETNEKLAPKIK 595
K + T +KL KI+
Sbjct: 188 KDMEQENASTIQKLTSKIR 206
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 278 QDFSKAWXDGSESVLQQLNAFAKSLQGALGD-ANGKAKEALEQSR-QNIERTAE 433
+D + A+ + SVLQ+L+ + +QG LG N AL Q + QN++ E
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGILGVLENPDLIAALRQDKGQNLQHLQE 132
>SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 168
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 302 DGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEE 436
DG+++ +LN FAK L + + +A + + IE+++ E
Sbjct: 112 DGTDAFANELNLFAKKLGFSKNSFDARALDTESEDETEIEKSSSE 156
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 27.9 bits (59), Expect = 2.0
Identities = 24/88 (27%), Positives = 45/88 (51%)
Frame = +2
Query: 203 IEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWXDGSESVLQQLNAFAKSLQGALGDANGK 382
IE K F K ++ NS K+ +A F +G++ ++ + A ++L L +
Sbjct: 73 IESSMKSF-KPVKIDLNSQLKAINA--FEAKASEGAKKNVELVKAELQNLSATLKN---- 125
Query: 383 AKEALEQSRQNIERTAEELRKAHPDVEK 466
+EQ+R E T E++++A P++EK
Sbjct: 126 ----IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 410 ASTVPKPPWPCRSRLRALPG 351
AST+ K PWP + L +PG
Sbjct: 38 ASTLEKEPWPASTALLVMPG 57
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.1 bits (57), Expect = 3.6
Identities = 21/88 (23%), Positives = 44/88 (50%)
Frame = +2
Query: 395 LEQSRQNIERTAEELRKAHPDVEKNATALRESLQAAVXNTVQESQKLAKKVSSNVQETNE 574
++ Q+IE T L K D+E++ ++ V + Q+ ++++ +Q+T E
Sbjct: 496 MKTQEQSIELT--RLYKQLQDIEEDYENKLMRMEQQWREDVDQLQEYVEEITQELQDTKE 553
Query: 575 KLAPKIKAAYDDFAKNTQEVIKKIQEAA 658
L+ K + DD+ +EV+ K++ A
Sbjct: 554 VLSKSSKES-DDY----EEVVGKLRTEA 576
>SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 27.1 bits (57), Expect = 3.6
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Frame = +2
Query: 257 LTKSKDAQDFSKAWXDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEE 436
+ S D+++ S+ D ++ L+ +NA Q + K+ E L SRQ+ A+E
Sbjct: 28 IASSSDSEEESEL--DTNKQALEHINA-----QKNITHNENKSAEPL--SRQSTILDADE 78
Query: 437 LRKAHPDVEKNATAL--RESLQAAVXNTVQE-----SQKLAKKVSSNVQETNEKLAPKIK 595
+ D NA R S ++A+ Q + + A + +N + L+
Sbjct: 79 GNQDVSDTTPNACLNEGRHSPKSAISCVTQPVSPVYNTRAAANLRNNSINSEAALSTTSS 138
Query: 596 AAYDDFAKNTQEVIKKIQE 652
DDFA+ +E+ +++QE
Sbjct: 139 LLDDDFARRLEEIDRQVQE 157
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +2
Query: 179 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 298
D +F D++ H K FH E+ + + +K D K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 26.6 bits (56), Expect = 4.7
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +2
Query: 233 TLEQQFNSLTKSKDAQDFSKAWXDGSESVLQQLNAFAKSLQGA------LGDANGKAKEA 394
T++ + SL K D + + ES L L L A L D+ KAK
Sbjct: 354 TIQIELESLRKETDTTSVERR--EKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTE 411
Query: 395 LEQSRQNIERTAEE 436
LEQ+R +ERT E
Sbjct: 412 LEQARIELERTQRE 425
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 6.2
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +2
Query: 347 SLQGALGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATALRESLQAA 502
S++ L + N + KE +E + RT +E EKN LRE L+ A
Sbjct: 520 SMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576
>SPAC23H4.11c |cnl2||centromere localized protein
Cnl2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 26.2 bits (55), Expect = 6.2
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +2
Query: 386 KEALEQSRQNIERTAEELRKAHPD--VEKNATALRESLQAAVXNTVQESQKLAKKVSSNV 559
++ L + R NI ++ + K+ D + N L+ A+ + V+E ++
Sbjct: 53 QKRLAKLRANIHLESQVIGKSRIDRMLATNVEKLQTVSHASTLHDVEEFYTSHSAKPLDI 112
Query: 560 QETNEKLAPKIKAAY 604
E NE+L+ +++AY
Sbjct: 113 SEINERLSEAVQSAY 127
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 26.2 bits (55), Expect = 6.2
Identities = 29/108 (26%), Positives = 50/108 (46%)
Frame = +2
Query: 308 SESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALRE 487
S + + A K L GA KAKE ++ R +RTA E+RK +E+ R
Sbjct: 143 SRRISGMILAHFKRLSGA---DEKKAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRR-RR 198
Query: 488 SLQAAVXNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQE 631
+ +AA V ++LA + ++ + + L +I+ A + + T E
Sbjct: 199 AERAAEAQRVAGKEQLA----NILKHSTDLLEARIERANINISAQTSE 242
>SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 512
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = +2
Query: 542 KVSSNVQET--NEKLAPKIKAAYD 607
+V N++ET EK A K+KA+YD
Sbjct: 299 EVDLNIEETVLKEKYADKVKASYD 322
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,105,276
Number of Sequences: 5004
Number of extensions: 31331
Number of successful extensions: 158
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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