Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_P24
(880 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 180 6e-44
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 114 2e-24
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 84 4e-15
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 77 4e-13
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 55 3e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 47 5e-04
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 45 0.002
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.048
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083
UniRef50_Q826D1 Cluster: Putative uncharacterized protein; n=1; ... 35 3.1
UniRef50_Q5IW58 Cluster: Phosphinothricin tripeptide synthetase ... 35 3.1
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 3.1
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.5
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.5
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_Q53075 Cluster: UvrC protein; n=1; Rhodobacter sphaeroi... 33 7.2
UniRef50_A6RF60 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 7.2
UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: Co... 33 9.6
UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillar... 33 9.6
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 180 bits (437), Expect = 6e-44
Identities = 86/104 (82%), Positives = 88/104 (84%)
Frame = +1
Query: 484 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPPGKLPRCALLFR 663
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFP + P CALLFR
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL-EAPSCALLFR 60
Query: 664 PCRLPDTCPPFSLREAWRFLIAHAVGISVRCXSSAPSWAVCXXP 795
PCRLPDTCPPFSLREAWRFLIAHAVGISVRC S APSWAVC P
Sbjct: 61 PCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 104
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 114 bits (275), Expect = 2e-24
Identities = 70/121 (57%), Positives = 75/121 (61%)
Frame = +1
Query: 316 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 495
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 496 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPPGKLPRCALLFRPCRL 675
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFP P CALLF P L
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPL-VAPSCALLFLPFGL 132
Query: 676 P 678
P
Sbjct: 133 P 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 84.2 bits (199), Expect = 4e-15
Identities = 42/55 (76%), Positives = 44/55 (80%)
Frame = +1
Query: 502 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPPGKLPRCALLFRP 666
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFP P CALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLA-APSCALLFLP 97
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 77.4 bits (182), Expect = 4e-13
Identities = 36/36 (100%), Positives = 36/36 (100%)
Frame = +3
Query: 648 RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 755
RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 2 RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 492 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 379
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 292 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 459
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 54.8 bits (126), Expect = 3e-06
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -2
Query: 795 GXXAHSPAWSGRXTPN*DTYSVSYEKAPRFPKGER 691
G A+SPAWS R P+ DT SVSYEKAPRFPKG++
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKK 61
Score = 39.9 bits (89), Expect = 0.083
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = -3
Query: 698 EKGGQVSGKRQGRNRRAXRGSFPGGKRLVSL*SCRVSPPLT 576
+K QVSGKRQGRNRRA G+ G K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGA-AGEKSPASLSPVGFRPPLT 99
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 47.2 bits (107), Expect = 5e-04
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +1
Query: 391 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 564
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 565 IDAQVRGGETRQDYKDTRRFPPGKLPRCALLFRP 666
I Q + +T+ +YK T FP + P +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPL-QSPSYSLLFPP 114
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 45.2 bits (102), Expect = 0.002
Identities = 30/73 (41%), Positives = 32/73 (43%)
Frame = +1
Query: 577 VRGGETRQDYKDTRRFPPGKLPRCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRC 756
VR GETRQD K LP P PPFSL + + GIS RC
Sbjct: 23 VRSGETRQDLKIIT-VSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARC 81
Query: 757 XSSAPSWAVCXXP 795
S APSWAV P
Sbjct: 82 RSFAPSWAVSKNP 94
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 95 DPDMIRYIDEFGQTTTRMQ 151
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 411 HSKAVIRLSTESGDNAGKNM 470
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.048
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 290 SALMNRPTRGERRFAYW 340
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 362 ERGSGRAPNTQTASPRALADSLMQ 291
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q826D1 Cluster: Putative uncharacterized protein; n=1;
Streptomyces avermitilis|Rep: Putative uncharacterized
protein - Streptomyces avermitilis
Length = 664
Score = 34.7 bits (76), Expect = 3.1
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -1
Query: 760 TYTELRYLQREL*ESATLPEGRKADRYPVSG-RVGTGERXEGAFQGGNAW 614
TYT R E E+ TLPE R RY +S + TG+R E AF G++W
Sbjct: 116 TYTVRR--NDETVETITLPERRAYARYTISRVELKTGDRLEIAFGSGSSW 163
>UniRef50_Q5IW58 Cluster: Phosphinothricin tripeptide synthetase II;
n=2; Streptomyces viridochromogenes|Rep:
Phosphinothricin tripeptide synthetase II - Streptomyces
viridochromogenes
Length = 1086
Score = 34.7 bits (76), Expect = 3.1
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = -2
Query: 651 SAXRELSRGETPGI-FIVLSG-FATSDLSVDFCDARQGGGAYGKTPAT 514
SA L+ GE PG+ +V++G AT +L+ +CD R YG T AT
Sbjct: 748 SALSTLTAGELPGLRTVVMAGEAATLELAQQWCDGRDVFNGYGPTEAT 795
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 3.1
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -3
Query: 725 MRKRHASRREKGGQVSGKRQGRN--RRAXRGSFPGGKR 618
+R+R A RR GG+ G+R+GRN RR RG P +R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQQRGQRPRKQR 392
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 501 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 379
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 173 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 340
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.5
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 253 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 89
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q53075 Cluster: UvrC protein; n=1; Rhodobacter
sphaeroides|Rep: UvrC protein - Rhodobacter sphaeroides
(Rhodopseudomonas sphaeroides)
Length = 117
Score = 33.5 bits (73), Expect = 7.2
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3
Query: 779 AQLGADDXHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAXR---GSFPGGK 621
A+ G HR A R+RHA+RR+ GG G+ Q R RA R G PGG+
Sbjct: 18 ARRGPPLGHRRPPGEAGQGRQRHAARRDPGG--GGRAQARAARAFRLGQGGGPGGR 71
>UniRef50_A6RF60 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 353
Score = 33.5 bits (73), Expect = 7.2
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = -2
Query: 849 PXGXKTIVPDKXHRSG*TGXXAHSPAWSGRXTPN*DTYSVSYEKAPRFPKGERRTGIR*A 670
P G VP++ G AH P+ SG T + ++ K PK +R T +
Sbjct: 215 PLGSLKGVPERIEEIG-ESISAHRPSLSGVATTSSADLEANFAKGMSPPKHDRGTVVSVT 273
Query: 669 AGSEQESAXRELS 631
+ SEQ RELS
Sbjct: 274 SPSEQNQLVRELS 286
>UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: CobN
- Silicibacter pomeroyi
Length = 1097
Score = 33.1 bits (72), Expect = 9.6
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -2
Query: 666 GSEQESAXRELSRGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 511
G E+ +L G++P +VLS F+ SDL +GGGA GK P R
Sbjct: 10 GLEETETPTDL--GQSPADLVVLS-FSDSDLGAFAAGWHRGGGAVGKLPTLR 58
>UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillarum
serovar O2|Rep: MobA protein - Listonella anguillarum
serovar O2
Length = 548
Score = 33.1 bits (72), Expect = 9.6
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 208 NGYK*SNSITNFTNKAFFSLHSSCG-LSKLINVSYHVWIQLTLXKGRSAAAVPTI 47
NG+K N + + L++ CG L +L+ + + + LT+ +GR A P++
Sbjct: 488 NGFKAGNGVERAVTNDYDELNAKCGHLDRLLRETDPIGLTLTMEQGRKADPTPSV 542
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,461,176
Number of Sequences: 1657284
Number of extensions: 16013438
Number of successful extensions: 43951
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 41856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43896
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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