Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P24
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           32   0.53 
07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708     29   3.7  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.5  
03_01_0125 + 977572-977879,978155-978275,979673-979846,979985-98...    29   6.5  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  
04_04_1105 - 30942735-30942791,30943116-30943466,30943670-309437...    28   8.6  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 722 RKRHASRREKGGQVSGKRQGRNRRAXRGSFPG 627
           R R   RR  GG+V+G+   R+RR  RG++ G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEG 270


>07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708
          Length = 2033

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 547  LTSITKIDAQVRGGETRQDYKDTRRFPPGKLPRC 648
            L  IT +D    GG  R      +R PP +L RC
Sbjct: 1462 LGEITTVDVNETGGGARSSLSFRQRMPPPRLQRC 1495


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 349 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 504
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>03_01_0125 +
           977572-977879,978155-978275,979673-979846,979985-980148,
           980245-980332,980426-980479,980571-980651,980895-981068
          Length = 387

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
 Frame = +3

Query: 573 SSQRWRNPTGL*RYQ-AFPPWKAPSXRSPVPTLPLTG--YLSAFL---PSGSVALSHSSR 734
           + Q W   + L  Y+ AFP W+A    + VPTL   G   LS  L   P+  +    +  
Sbjct: 262 NEQSWPGVSSLPDYKSAFPKWQAQDLATIVPTLDPAGLDLLSKMLRYEPNKRITARQALE 321

Query: 735 CRYLSSVXVVRSKLGC 782
             Y   + +++  L C
Sbjct: 322 HEYFKDLEMIQIALRC 337


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 298 NESAN---ARGEAVCVLGALPLPRSLTRCAR 381
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>04_04_1105 -
           30942735-30942791,30943116-30943466,30943670-30943762,
           30943869-30944072,30944155-30944399,30945019-30945877,
           30946070-30946936,30947113-30947562
          Length = 1041

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
 Frame = +1

Query: 670 RLPDTCPPFSLREAWRFLIA-----HAVGISVRCXSS 765
           RL D C P  L+E WRFL+A      A   S RC +S
Sbjct: 849 RLAD-CDPRVLKEQWRFLVAFWNTEEAQAASARCKAS 884


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,198,829
Number of Sequences: 37544
Number of extensions: 482692
Number of successful extensions: 1484
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)