Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P23
         (870 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.5  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   7.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   9.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 438  ETLPPISTPTPRIIEVTENVTEA 506
            ET+PPI    P +  V E   EA
Sbjct: 1773 ETIPPIDEEPPSVEAVEEEREEA 1795


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +3

Query: 333 YTVDCNHEYADCDTELSKIANDEEEVPSTTSSQTLETLPPISTPTP 470
           +T+  NH+Y   D E  +  +D+++     S+   E   P  T +P
Sbjct: 268 HTLSMNHKYEKIDKEEHESMDDDDDDDDDMSNS--ENQNPRFTSSP 311


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 179 LYFFVRKCLYLCFSAVHRCVAG 244
           L   + KC+    S+++ C+AG
Sbjct: 228 LILILAKCITSSLSSLYTCIAG 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,469
Number of Sequences: 336
Number of extensions: 2705
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)