Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_P23
(870 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0961 + 8070992-8071015,8071016-8071089,8073051-8073200,807... 33 0.30
01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425... 32 0.69
09_06_0308 - 22199389-22199451,22199604-22199924,22200178-222004... 31 1.6
12_01_0419 - 3316866-3318172,3318249-3318360 30 2.1
11_06_0123 + 20334350-20334553,20335059-20335490,20336052-203361... 30 2.1
03_01_0071 + 580988-581134,581276-581359,581499-581573,581892-58... 30 2.8
04_03_0846 - 20249085-20249192,20249418-20249501,20249687-202498... 29 3.7
08_02_0657 - 19749835-19751942,19753123-19753561 29 6.4
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 29 6.4
01_05_0490 + 22672241-22674679 29 6.4
11_01_0205 + 1617044-1617197,1617845-1618233 28 8.5
>07_01_0961 +
8070992-8071015,8071016-8071089,8073051-8073200,
8073307-8073592,8074077-8074220,8074357-8074665
Length = 328
Score = 33.1 bits (72), Expect = 0.30
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +3
Query: 342 DCNHEYADCDTELSKIANDEEEVPST-TSSQTLETLPPISTPTPRIIEVTENVTEAELTK 518
D H++A E +N+EE+ P+ +S+ + T+ I +++ + LT
Sbjct: 222 DTVHQFAPTYHEYVLYSNEEEDEPTKYSSASVVSTVQDIQLVEVSVVDSKAPLASVILTH 281
Query: 519 EAEVTTE---VQEAIEPKPQPKLLNLNVDELQNFA 614
EA+ T ++E + P L NL EL N++
Sbjct: 282 EADKTMPSHGMEETVAPSEPYDLSNLVDVELSNYS 316
>01_01_0573 +
4253484-4254653,4255526-4255735,4255842-4255937,
4256034-4256255,4256829-4257023,4257097-4257243,
4257323-4257472,4257762-4257892,4257978-4258194
Length = 845
Score = 31.9 bits (69), Expect = 0.69
Identities = 27/109 (24%), Positives = 52/109 (47%)
Frame = +3
Query: 327 SAYTVDCNHEYADCDTELSKIANDEEEVPSTTSSQTLETLPPISTPTPRIIEVTENVTEA 506
+A D N + A + + + S S +ET + P+ + ++ T NV A
Sbjct: 525 AASGTDVNMQEAKAPADAAADGAENGAPNSEEKSVPMETDAKVE-PSKKKVKKT-NVPVA 582
Query: 507 ELTKEAEVTTEVQEAIEPKPQPKLLNLNVDELQNFANALHNQTIEKSSK 653
EL A TTE+Q+A+E + + L + ++E ++ NA+ + + +K
Sbjct: 583 ELVYGALGTTELQKAVEKEYEMALQDRVMEETKDKKNAVESYVYDMRNK 631
>09_06_0308 -
22199389-22199451,22199604-22199924,22200178-22200423,
22202152-22203337,22203487-22203551,22204205-22204486,
22205005-22205106,22205587-22206105
Length = 927
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 390 ANDEEEVPSTTSSQTLETLPPISTPTPRIIEVTENVTEA--ELTKEAEVTTEVQEAIEPK 563
A +E +VP + + P EV E EA E+ +EAE EV E +EP
Sbjct: 81 AAEESDVPEESDQEEEGYAPEAEEEAEADEEVEEEAVEASAEVAEEAEDVEEVGEYVEPP 140
Query: 564 PQPKL 578
+ K+
Sbjct: 141 EEAKV 145
>12_01_0419 - 3316866-3318172,3318249-3318360
Length = 472
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +3
Query: 339 VDCNHEYADCDTELSKIANDEEEVPSTTSSQTLETLPPISTPTPRIIEVTENVTEAELTK 518
V+ E D D + ++++ E E + + E+ P P +E T E E+
Sbjct: 170 VETEVELDDDDDDEDELSSLELEYEDWINVDSSESEPEPEPPRDVAVE-TPVAVEEEVAV 228
Query: 519 EAEVTTEVQEAIE---PKPQPKLLNLNVD 596
E EV E A+E P P P ++++ D
Sbjct: 229 EEEVAVETPVAVEEPPPPPPPSVVDIECD 257
>11_06_0123 +
20334350-20334553,20335059-20335490,20336052-20336191,
20336281-20336401,20337110-20337250,20337421-20337663
Length = 426
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +3
Query: 324 TSAYTVDCNHEYADCDTELSKIANDEEEVPSTTSSQTLETLPPISTPTPRIIEVTENVTE 503
T A + + E D E++ N+ ++ +T S Q E P+ E T+N E
Sbjct: 96 TFADSDSSDDEEEDHSGEVTDDTNNADKGETTPSEQQKEVSDTPVVPSKDNEEQTDNADE 155
Query: 504 AELTKEAEVTTEVQEAIEPK 563
++L K+ + E EPK
Sbjct: 156 SKLKKQRVQDPPISEQTEPK 175
>03_01_0071 +
580988-581134,581276-581359,581499-581573,581892-581973,
582078-582223,582337-582408,582765-582837,582933-582998,
583089-583123,583316-583387,583494-583622,583706-583813,
584062-584118,584323-584439,584530-584612,585345-585411,
585705-585776,585874-585924,586704-586763,586867-587016,
587107-587322
Length = 653
Score = 29.9 bits (64), Expect = 2.8
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 414 STTSSQTLETLPPISTPTPR--IIEVTENVTEAELTKEAEVTTEVQEAIEPKPQPKLLNL 587
S++S+ T +S+ T R II V + + EA VQ+AI+P+ Q L+
Sbjct: 26 SSSSALAAATSAAVSSHTDRDRIIGVFRDALSRTESPEAFALQAVQDAIKPQKQTVLV-- 83
Query: 588 NVDELQNFANALHNQTIEKSSKRV 659
++E Q+ NAL E +S V
Sbjct: 84 -LEENQSLENALRKLLQELASSAV 106
>04_03_0846 -
20249085-20249192,20249418-20249501,20249687-20249803,
20249899-20249979,20250563-20250622,20250762-20250804,
20250899-20250997,20251260-20251531,20251765-20251886,
20252376-20252517
Length = 375
Score = 29.5 bits (63), Expect = 3.7
Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
Frame = +3
Query: 369 DTELSKIANDEEEVPSTTSSQTLETLPPISTPTPRIIEVTENVTEAELTKEAEVTTEVQE 548
D K +EEE+P+ + + I ++ ENVTE + E T E +
Sbjct: 91 DDNKVKPFEEEEEIPAVAEASIKVVAEDKLESSEVIQDIEENVTEGVIKDADEPTVEDKP 150
Query: 549 AIEPKPQPKLLNLNVDE-LQNFANALHNQTIEKSSKRVWI 665
+ P P +D L+ F N L + E R I
Sbjct: 151 RVIPPPGDGQKIYQIDPMLEGFRNHLDYRYSEYKRMRAAI 190
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +3
Query: 396 DEEEVPSTTSSQTLETLPPISTPTPRIIEVTENVTEAELTKEAEVTTEVQEAIEPKPQPK 575
DEEE P+T P + R++ + T+AEL EAE + + E K + K
Sbjct: 769 DEEEAPATE--------PELPVGQLRLVAKPKTKTKAELEAEAEAAAKAKAEAEAKAKAK 820
Query: 576 L 578
L
Sbjct: 821 L 821
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 438 ETLPPIS--TPTPRIIEVTENVTEAELTKEAEVTTEVQEAIEPKPQPK 575
E++PP+ P P+ + E EA K E E +EA PKP+PK
Sbjct: 219 ESVPPVQKKAPPPKEQKPKEAKKEAPKPKAVEKPEEEEEA--PKPKPK 264
>01_05_0490 + 22672241-22674679
Length = 812
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +3
Query: 399 EEEVPSTTSSQTLETLPPISTPTPRIIEVTENVTEAELTKEAEVTTEVQEAIEPKPQPKL 578
EEE P Q +ET+ P P R + E L +E+ V +E P P P L
Sbjct: 289 EEERPHPQPQQPVETVTPTPPPLARSRRWNPEMLEVVLEQESRV----EETTMPPPPPPL 344
>11_01_0205 + 1617044-1617197,1617845-1618233
Length = 180
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +3
Query: 372 TELSKIANDEEEVPSTTSSQTLETLPPISTPTPRIIEVTENVTEAELTKEAEVTTEVQEA 551
TEL ++A+ E+ STT+ ++ P + T +E +A + + E+TTE +
Sbjct: 74 TELGELASRED---STTADNNVDLTPKHQSLTASKMETIHVRAKAHINPDEELTTE--DY 128
Query: 552 IEPKPQPKLLNLNVDE 599
P+P + L+ +E
Sbjct: 129 PRPRPNHPSIALSNEE 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,855,761
Number of Sequences: 37544
Number of extensions: 265506
Number of successful extensions: 837
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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