Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P21
         (1252 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5Z5J2 Cluster: Putative uncharacterized protein OSJNBa...    36   2.2  
UniRef50_Q2IGU1 Cluster: General secretory system II, protein E-...    34   8.8  

>UniRef50_Q5Z5J2 Cluster: Putative uncharacterized protein
           OSJNBa0031J07.2; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBa0031J07.2 - Oryza sativa subsp. japonica (Rice)
          Length = 116

 Score = 35.9 bits (79), Expect = 2.2
 Identities = 17/49 (34%), Positives = 19/49 (38%)
 Frame = +3

Query: 372 VPPXAXRGGXGXXXXXPXXXXPGXGATGXRHRPHPXXRPTXSSPXPXXG 518
           +PP A   G G     P    P   AT   HRP P   P   +P P  G
Sbjct: 3   LPPLATAAGRGPADLRPATRCPPLAATAAAHRPPPGAAPPAFTPPPTVG 51


>UniRef50_Q2IGU1 Cluster: General secretory system II, protein
           E-like; n=1; Anaeromyxobacter dehalogenans 2CP-C|Rep:
           General secretory system II, protein E-like -
           Anaeromyxobacter dehalogenans (strain 2CP-C)
          Length = 478

 Score = 33.9 bits (74), Expect = 8.8
 Identities = 24/79 (30%), Positives = 26/79 (32%), Gaps = 1/79 (1%)
 Frame = +3

Query: 276 AXTXPGXXAPXP-GARXXRPPXXXXAAALRXXXVPPXAXRGGXGXXXXXPXXXXPGXGAT 452
           A T P   AP P GA   R P            +PP   R   G     P    P  GA 
Sbjct: 260 APTAPARPAPPPPGAAAGRVPAGPTRPLPAPGTLPPPGARPSPGAPAFRPPPPAPA-GAV 318

Query: 453 GXRHRPHPXXRPTXSSPXP 509
                P P  RP  + P P
Sbjct: 319 RPGQAPQPVPRPGAAPPPP 337


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,330,808
Number of Sequences: 1657284
Number of extensions: 5912538
Number of successful extensions: 17176
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16935
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 126745205567
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)