Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P21
         (1252 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11072-1|CAA71955.1|  685|Homo sapiens synaptopodin protein.           32   5.0  
BC146665-1|AAI46666.1|  685|Homo sapiens synaptopodin protein.         32   5.0  
BC142683-1|AAI42684.1|  685|Homo sapiens SYNPO protein protein.        32   5.0  
AF499137-1|AAQ07403.1|  903|Homo sapiens synaptopodin protein.         32   5.0  
AF499136-1|AAQ07402.1|  903|Homo sapiens synaptopodin protein.         32   5.0  
AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein.     32   5.0  

>Y11072-1|CAA71955.1|  685|Homo sapiens synaptopodin protein.
          Length = 685

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 1106 PLSXPAXVSPRXXVGARPCSXAL-PTXXRGAEPXPASXXTPSXPRP 1240
            P+  PA VSPR    A+P S  L P   +GA P   +   PS   P
Sbjct: 576  PIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSP 621


>BC146665-1|AAI46666.1|  685|Homo sapiens synaptopodin protein.
          Length = 685

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 1106 PLSXPAXVSPRXXVGARPCSXAL-PTXXRGAEPXPASXXTPSXPRP 1240
            P+  PA VSPR    A+P S  L P   +GA P   +   PS   P
Sbjct: 576  PIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSP 621


>BC142683-1|AAI42684.1|  685|Homo sapiens SYNPO protein protein.
          Length = 685

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 1106 PLSXPAXVSPRXXVGARPCSXAL-PTXXRGAEPXPASXXTPSXPRP 1240
            P+  PA VSPR    A+P S  L P   +GA P   +   PS   P
Sbjct: 576  PIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSP 621


>AF499137-1|AAQ07403.1|  903|Homo sapiens synaptopodin protein.
          Length = 903

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 1106 PLSXPAXVSPRXXVGARPCSXAL-PTXXRGAEPXPASXXTPSXPRP 1240
            P+  PA VSPR    A+P S  L P   +GA P   +   PS   P
Sbjct: 576  PIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSP 621


>AF499136-1|AAQ07402.1|  903|Homo sapiens synaptopodin protein.
          Length = 903

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 1106 PLSXPAXVSPRXXVGARPCSXAL-PTXXRGAEPXPASXXTPSXPRP 1240
            P+  PA VSPR    A+P S  L P   +GA P   +   PS   P
Sbjct: 576  PIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSP 621


>AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein.
          Length = 1015

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 1106 PLSXPAXVSPRXXVGARPCSXAL-PTXXRGAEPXPASXXTPSXPRP 1240
            P+  PA VSPR    A+P S  L P   +GA P   +   PS   P
Sbjct: 688  PIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSP 733


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,294,348
Number of Sequences: 237096
Number of extensions: 1187287
Number of successful extensions: 3225
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3202
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17834978520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)