BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_P20
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105587-1|AAI05588.1| 167|Homo sapiens family with sequence si... 49 3e-05
AK098819-1|BAC05423.1| 167|Homo sapiens protein ( Homo sapiens ... 49 3e-05
BC021179-1|AAH21179.1| 167|Homo sapiens family with sequence si... 48 6e-05
BC040049-1|AAH40049.1| 148|Homo sapiens family with sequence si... 31 4.3
AL596094-8|CAI13367.1| 2430|Homo sapiens chromosome 10 open read... 31 4.3
AL365356-3|CAH72616.1| 2430|Homo sapiens chromosome 10 open read... 31 4.3
AL121886-4|CAC08393.1| 148|Homo sapiens family with sequence si... 31 4.3
AL121886-5|CAI18926.1| 123|Homo sapiens family with sequence si... 31 5.6
BC051728-1|AAH51728.1| 737|Homo sapiens suppressor of hairy win... 31 7.5
BC009994-1|AAH09994.1| 644|Homo sapiens JMJD3 protein protein. 31 7.5
AL139234-5|CAI42782.1| 737|Homo sapiens suppressor of hairy win... 31 7.5
AL133204-1|CAB61579.1| 610|Homo sapiens hypothetical protein pr... 31 7.5
AL023799-2|CAI42593.1| 737|Homo sapiens suppressor of hairy win... 31 7.5
AL023799-1|CAI42592.1| 610|Homo sapiens suppressor of hairy win... 31 7.5
AK000102-1|BAA90947.1| 631|Homo sapiens protein ( Homo sapiens ... 31 7.5
AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein. 31 7.5
>BC105587-1|AAI05588.1| 167|Homo sapiens family with sequence
similarity 112, member B protein.
Length = 167
Score = 48.8 bits (111), Expect = 3e-05
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Frame = +1
Query: 229 YTCRKCRKQHP--ACNKVQCPFDATHVVNDVELDFHVTVCPKRHMLDTQLYITDDEYRPT 402
Y KCRK HP A CPF+A H V E+ H++ C R ++ + R
Sbjct: 32 YHLIKCRKNHPDVASKLATCPFNARHQVPRAEISHHISSCDDRSCIEQDVVNQTRSLRQE 91
Query: 403 VEVHAT-PVLPSDENWD----DETSTSYI 474
+T P DE+WD ++TST ++
Sbjct: 92 TLAESTWQCPPCDEDWDKDLWEQTSTPFV 120
>AK098819-1|BAC05423.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ25953 fis, clone TST01594. ).
Length = 167
Score = 48.8 bits (111), Expect = 3e-05
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Frame = +1
Query: 229 YTCRKCRKQHP--ACNKVQCPFDATHVVNDVELDFHVTVCPKRHMLDTQLYITDDEYRPT 402
Y KCRK HP A CPF+A H V E+ H++ C R ++ + R
Sbjct: 32 YHLIKCRKNHPDVASKLATCPFNARHQVPRAEISHHISSCDDRSCIEQDVVNQTRSLRQE 91
Query: 403 VEVHAT-PVLPSDENWD----DETSTSYI 474
+T P DE+WD ++TST ++
Sbjct: 92 TLAESTWQCPPCDEDWDKDLWEQTSTPFV 120
>BC021179-1|AAH21179.1| 167|Homo sapiens family with sequence
similarity 112, member B protein.
Length = 167
Score = 47.6 bits (108), Expect = 6e-05
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = +1
Query: 229 YTCRKCRKQHP--ACNKVQCPFDATHVVNDVELDFHVTVCPKRHMLDTQLYITDDEYRPT 402
Y KCRK HP A CPF+A H V E+ H++ C R ++ + R
Sbjct: 32 YHLIKCRKNHPDVASKLATCPFNARHQVPRAEISHHISSCDDRSCIEQDVVNQTRSLRQE 91
Query: 403 VEVHAT-PVLPSDENWD----DETSTSY 471
+T P DE+WD ++TST +
Sbjct: 92 TLAESTWQCPPCDEDWDKDLWEQTSTPF 119
>BC040049-1|AAH40049.1| 148|Homo sapiens family with sequence
similarity 112, member A protein.
Length = 148
Score = 31.5 bits (68), Expect = 4.3
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Frame = +1
Query: 229 YTCRKCRKQHP--ACNKVQCPFDATHVVNDVELDFHVTVCPKRHML---DTQ--LYITDD 387
Y CR+++P A C ++A HVV L+ H VC R + DT+ L ++
Sbjct: 24 YHLASCRRKNPKKAKKMATCKYNACHVVPIKNLEEHEAVCVNRSAVEEEDTENPLKVSPP 83
Query: 388 EYRPTVEV-HATPVLPSDENWD 450
+ +P LPS + W+
Sbjct: 84 SSEQNDDTQQVSPCLPSPDIWN 105
>AL596094-8|CAI13367.1| 2430|Homo sapiens chromosome 10 open reading
frame 18 protein.
Length = 2430
Score = 31.5 bits (68), Expect = 4.3
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +1
Query: 430 PSDENWDDETSTSYI-PDPS----KKGAHVITKAKGL-TRSERQSLRKELIKTYRP 579
PS E DD + I P+P +K AHV + +G+ T ER + +KELIK P
Sbjct: 1033 PSLERKDDNMGCAVINPEPITLTFEKNAHVPIQTEGVNTADERTTFKKELIKQVSP 1088
>AL365356-3|CAH72616.1| 2430|Homo sapiens chromosome 10 open reading
frame 18 protein.
Length = 2430
Score = 31.5 bits (68), Expect = 4.3
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +1
Query: 430 PSDENWDDETSTSYI-PDPS----KKGAHVITKAKGL-TRSERQSLRKELIKTYRP 579
PS E DD + I P+P +K AHV + +G+ T ER + +KELIK P
Sbjct: 1033 PSLERKDDNMGCAVINPEPITLTFEKNAHVPIQTEGVNTADERTTFKKELIKQVSP 1088
>AL121886-4|CAC08393.1| 148|Homo sapiens family with sequence
similarity 112, member A protein.
Length = 148
Score = 31.5 bits (68), Expect = 4.3
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Frame = +1
Query: 229 YTCRKCRKQHP--ACNKVQCPFDATHVVNDVELDFHVTVCPKRHML---DTQ--LYITDD 387
Y CR+++P A C ++A HVV L+ H VC R + DT+ L ++
Sbjct: 24 YHLASCRRKNPKKAKKMATCKYNACHVVPIKNLEEHEAVCVNRSAVEEEDTENPLKVSPP 83
Query: 388 EYRPTVEV-HATPVLPSDENWD 450
+ +P LPS + W+
Sbjct: 84 SSEQNDDTQQVSPCLPSPDIWN 105
>AL121886-5|CAI18926.1| 123|Homo sapiens family with sequence
similarity 112, member A protein.
Length = 123
Score = 31.1 bits (67), Expect = 5.6
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = +1
Query: 229 YTCRKCRKQHP--ACNKVQCPFDATHVVNDVELDFHVTVCPKRHMLDTQLYITDDEYRPT 402
Y CR+++P A C ++A HVV L+ H VC R ++ +D P
Sbjct: 24 YHLASCRRKNPKKAKKMATCKYNACHVVPIKNLEEHEAVCVNRSAVE-----EEDTENP- 77
Query: 403 VEVHATPVLPSDENWDDETSTSYIPDPSKKGAHVITKAKGLTRSERQSLR 552
+ +P PS E DD T + P K TK S ++ LR
Sbjct: 78 --LKVSP--PSSEQNDDTQQTFF---PQKVVCENDTKESARETSPQKILR 120
>BC051728-1|AAH51728.1| 737|Homo sapiens suppressor of hairy wing
homolog 3 (Drosophila) protein.
Length = 737
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +1
Query: 232 TCRKCRKQHPACNKVQCPFDATHVVND-------VELDFHVTVCPKRHMLDT 366
TC+ C +Q+P ++QC ++TH ++ EL F +HM DT
Sbjct: 354 TCQHCYRQYPTPFQLQCHIESTHTPHEFSTICKICELSFETEHILLQHMKDT 405
>BC009994-1|AAH09994.1| 644|Homo sapiens JMJD3 protein protein.
Length = 644
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 400 TVEVHATPVLPSDENWDDETSTSYIPDPSKKGAHVITK-AKGLTRSERQSLRKE 558
TVEV PSDENWD + P S + I K A+ S ++SL++E
Sbjct: 243 TVEVRTQVQQPSDENWDLTGTRQIWPCESSRSHTTIAKYAQYQASSFQESLQEE 296
>AL139234-5|CAI42782.1| 737|Homo sapiens suppressor of hairy wing
homolog 3 (Drosophila) protein.
Length = 737
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +1
Query: 232 TCRKCRKQHPACNKVQCPFDATHVVND-------VELDFHVTVCPKRHMLDT 366
TC+ C +Q+P ++QC ++TH ++ EL F +HM DT
Sbjct: 354 TCQHCYRQYPTPFQLQCHIESTHTPHEFSTICKICELSFETEHILLQHMKDT 405
>AL133204-1|CAB61579.1| 610|Homo sapiens hypothetical protein
protein.
Length = 610
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +1
Query: 232 TCRKCRKQHPACNKVQCPFDATHVVND-------VELDFHVTVCPKRHMLDT 366
TC+ C +Q+P ++QC ++TH ++ EL F +HM DT
Sbjct: 354 TCQHCYRQYPTPFQLQCHIESTHTPHEFSTICKICELSFETEHILLQHMKDT 405
>AL023799-2|CAI42593.1| 737|Homo sapiens suppressor of hairy wing
homolog 3 (Drosophila) protein.
Length = 737
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +1
Query: 232 TCRKCRKQHPACNKVQCPFDATHVVND-------VELDFHVTVCPKRHMLDT 366
TC+ C +Q+P ++QC ++TH ++ EL F +HM DT
Sbjct: 354 TCQHCYRQYPTPFQLQCHIESTHTPHEFSTICKICELSFETEHILLQHMKDT 405
>AL023799-1|CAI42592.1| 610|Homo sapiens suppressor of hairy wing
homolog 3 (Drosophila) protein.
Length = 610
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +1
Query: 232 TCRKCRKQHPACNKVQCPFDATHVVND-------VELDFHVTVCPKRHMLDT 366
TC+ C +Q+P ++QC ++TH ++ EL F +HM DT
Sbjct: 354 TCQHCYRQYPTPFQLQCHIESTHTPHEFSTICKICELSFETEHILLQHMKDT 405
>AK000102-1|BAA90947.1| 631|Homo sapiens protein ( Homo sapiens
cDNA FLJ20095 fis, clone COL04372. ).
Length = 631
Score = 30.7 bits (66), Expect = 7.5
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +1
Query: 232 TCRKCRKQHPACNKVQCPFDATHVVND-------VELDFHVTVCPKRHMLDT 366
TC+ C +Q+P ++QC ++TH ++ EL F +HM DT
Sbjct: 354 TCQHCYRQYPTPFQLQCHIESTHTPHEFSTICKICELSFETEHILLQHMKDT 405
>AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein.
Length = 1682
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 400 TVEVHATPVLPSDENWDDETSTSYIPDPSKKGAHVITK-AKGLTRSERQSLRKE 558
TVEV PSDENWD + P S + I K A+ S ++SL++E
Sbjct: 1242 TVEVRTQVQQPSDENWDLTGTRQIWPCESSRSHTTIAKYAQYQASSFQESLQEE 1295
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,667,800
Number of Sequences: 237096
Number of extensions: 2049938
Number of successful extensions: 4852
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4815
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -