Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P19
         (906 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    62   5e-10
AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    62   5e-10
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    29   3.5  
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen...    29   6.0  

>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 28/64 (43%), Positives = 41/64 (64%)
 Frame = +2

Query: 152 AIILAVLGGKTTPAAADVEKILSSVGIEADAXKLKKVITELNGKDVEQLIAAGREKLSSM 331
           A +LA LGG  +P+A DV K+L + G++ D      V+  L GK + ++IA G+ KLSS+
Sbjct: 6   AYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSV 65

Query: 332 PVGG 343
           P GG
Sbjct: 66  PSGG 69


>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 40/107 (37%), Positives = 49/107 (45%)
 Frame = +2

Query: 152 AIILAVLGGKTTPAAADVEKILSSVGIEADAXKLKKVITELNGKDVEQLIAAGREKLSSM 331
           A +LAVLGG   P   D++ ILS+VG++ADA   K V++ L GK VE+LIA G   L S 
Sbjct: 6   AYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSAGLVS- 64

Query: 332 PVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 472
            V GG                                   MGFGLFD
Sbjct: 65  -VSGGAAPAAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 182 TTPAAADVEKILSSVGIEADAXKLKKVITEL-NGKDVEQLI 301
           +TPA+A   +I  + GI     K+  +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 182 TTPAAADVEKILSSVGIEADAXKLKKVITEL-NGKDVEQLI 301
           +TPA+A   +I  + GI     K+  +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
           on autosome protein2 protein.
          Length = 1758

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -1

Query: 279 PLSSVITFLSXSASASIPTELRIFSTSAAAGVVLPPSTASIIARPR 142
           PLSS+ +  S +A +SI        ++ ++ +  PPST+S    PR
Sbjct: 201 PLSSITSISSSAAGSSISAPSTSQPSTTSSLITSPPSTSSSSMAPR 246


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,139,377
Number of Sequences: 27780
Number of extensions: 159297
Number of successful extensions: 355
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)