Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P18
         (999 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608           31   1.9  

>05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608
          Length = 325

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 17/64 (26%), Positives = 23/64 (35%)
 Frame = +1

Query: 577 IDHVSKKAQPKGXETXKXAELPWAXXXXXPAPPNDPSGXIRXXNPECG*PPDKGPKNXSP 756
           +D   + A+P+  E  K AE P A     P PP  P       + E     D  P   + 
Sbjct: 178 LDAACRAAEPEALEAKKKAEAPVAPAAAPPPPPPQPKKKAPPKSSEASRDRDNKPLKLTA 237

Query: 757 AVSP 768
              P
Sbjct: 238 TQQP 241


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,549,645
Number of Sequences: 37544
Number of extensions: 262249
Number of successful extensions: 473
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2928685000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)