Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P17
         (911 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis thalian...    27   6.0  
UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14; Fungi/M...    28   7.7  
UniRef50_Q54H12 Cluster: Actin-binding protein; n=2; Dictyosteli...    25   8.1  

>UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis
            thaliana|Rep: Gb|AAD23008.1 - Arabidopsis thaliana
            (Mouse-ear cress)
          Length = 1289

 Score = 26.6 bits (56), Expect(2) = 6.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2

Query: 460  PPPPPPXGGXXXG 422
            PPPPPP GG   G
Sbjct: 1148 PPPPPPPGGRAPG 1160



 Score = 25.8 bits (54), Expect(2) = 6.0
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 463  PPPPPPPXG 437
            PPPPPPP G
Sbjct: 1134 PPPPPPPGG 1142


>UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14;
            Fungi/Metazoa group|Rep: Cytokinesis protein sepA -
            Emericella nidulans (Aspergillus nidulans)
          Length = 1790

 Score = 28.3 bits (60), Expect(2) = 10.0
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -2

Query: 463  PPPPPPPXGG 434
            PPPPPPP GG
Sbjct: 1055 PPPPPPPPGG 1064



 Score = 28.3 bits (60), Expect(2) = 7.7
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -2

Query: 463  PPPPPPPXGG 434
            PPPPPPP GG
Sbjct: 1083 PPPPPPPPGG 1092



 Score = 23.8 bits (49), Expect(2) = 7.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 460  PPPPPPXGGXXXGXK 416
            PPPPPP G    G +
Sbjct: 1111 PPPPPPPGTVIGGWR 1125



 Score = 23.4 bits (48), Expect(2) = 10.0
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 460  PPPPPPXGGXXXG 422
            PPPPPP  G   G
Sbjct: 1083 PPPPPPPPGGFGG 1095


>UniRef50_Q54H12 Cluster: Actin-binding protein; n=2; Dictyostelium
           discoideum|Rep: Actin-binding protein - Dictyostelium
           discoideum AX4
          Length = 1220

 Score = 25.4 bits (53), Expect(3) = 8.1
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 460 PPPPPPXGG 434
           PPPPPP GG
Sbjct: 621 PPPPPPMGG 629



 Score = 23.8 bits (49), Expect(3) = 8.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 463 PPPPPPP 443
           PPPPPPP
Sbjct: 594 PPPPPPP 600



 Score = 21.0 bits (42), Expect(3) = 8.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 454 PPPPXGGXXXG 422
           PPPP GG   G
Sbjct: 633 PPPPPGGGGFG 643


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 293,251,842
Number of Sequences: 1657284
Number of extensions: 3433741
Number of successful extensions: 62523
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51588
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83211448033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)