Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P17
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       27   0.19 
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    26   2.5  
05_04_0011 + 17139322-17139451,17139552-17140174                       24   6.3  
01_01_0083 + 631196-631675                                             29   6.8  
01_06_1765 + 39735629-39736240                                         24   8.4  
01_01_0715 - 5542648-5543219,5543352-5543544                           28   9.0  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 26.6 bits (56), Expect(2) = 0.19
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2

Query: 460 PPPPPPXGGXXXG 422
           PPPPPP GG   G
Sbjct: 364 PPPPPPPGGKKGG 376



 Score = 25.8 bits (54), Expect(2) = 0.19
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 463 PPPPPPPXG 437
           PPPPPPP G
Sbjct: 353 PPPPPPPKG 361



 Score = 25.8 bits (54), Expect(2) = 0.42
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 463 PPPPPPPXG 437
           PPPPPPP G
Sbjct: 364 PPPPPPPGG 372



 Score = 25.4 bits (53), Expect(2) = 0.42
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 460 PPPPPPXGG 434
           PPPPPP GG
Sbjct: 377 PPPPPPKGG 385



 Score = 23.8 bits (49), Expect(2) = 7.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 463 PPPPPPP 443
           PPPPPPP
Sbjct: 326 PPPPPPP 332



 Score = 23.0 bits (47), Expect(2) = 7.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 460 PPPPPPXG 437
           PPPPPP G
Sbjct: 336 PPPPPPKG 343


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 25.8 bits (54), Expect(2) = 2.5
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 463  PPPPPPPXG 437
            PPPPPPP G
Sbjct: 1109 PPPPPPPGG 1117



 Score = 22.6 bits (46), Expect(2) = 2.5
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 457  PPPPPXGG 434
            PPPPP GG
Sbjct: 1122 PPPPPIGG 1129


>05_04_0011 + 17139322-17139451,17139552-17140174
          Length = 250

 Score = 23.8 bits (49), Expect(2) = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 463 PPPPPPP 443
           PPPPPPP
Sbjct: 67  PPPPPPP 73



 Score = 23.4 bits (48), Expect(2) = 6.3
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 460 PPPPPPXGGXXXGXKKI 410
           PPPPPP      G K I
Sbjct: 103 PPPPPPPPSPPNGGKVI 119


>01_01_0083 + 631196-631675
          Length = 159

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 417 FXPXXXPPXGGGGGGG 464
           + P   PP GGGGGGG
Sbjct: 87  YIPYYQPPAGGGGGGG 102


>01_06_1765 + 39735629-39736240
          Length = 203

 Score = 23.8 bits (49), Expect(2) = 8.4
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 463 PPPPPPP 443
           PPPPPPP
Sbjct: 98  PPPPPPP 104



 Score = 23.0 bits (47), Expect(2) = 8.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 460 PPPPPPXGG 434
           PPPPPP  G
Sbjct: 132 PPPPPPASG 140


>01_01_0715 - 5542648-5543219,5543352-5543544
          Length = 254

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -2

Query: 463 PPPPPPPXGG 434
           PPPPPPP GG
Sbjct: 189 PPPPPPPAGG 198


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,809,119
Number of Sequences: 37544
Number of extensions: 166219
Number of successful extensions: 8657
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7405
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)