Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_P17
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 0.37
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 0.37
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 0.37
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 26 2.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 26 2.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 26 2.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 3.0
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 3.5
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 28 8.1
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 28 8.1
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 28 8.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 463 PPPPPPPXGGXXXG 422
PPPPPPP GG G
Sbjct: 770 PPPPPPPPGGFKGG 783
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 463 PPPPPPPXGG 434
PPPPPPP GG
Sbjct: 758 PPPPPPPPGG 767
Score = 25.8 bits (54), Expect(2) = 0.37
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 463 PPPPPPPXG 437
PPPPPPP G
Sbjct: 726 PPPPPPPGG 734
Score = 25.4 bits (53), Expect(2) = 0.37
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 460 PPPPPPXGG 434
PPPPPP GG
Sbjct: 742 PPPPPPPGG 750
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 463 PPPPPPPXGGXXXG 422
PPPPPPP GG G
Sbjct: 770 PPPPPPPPGGFKGG 783
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 463 PPPPPPPXGG 434
PPPPPPP GG
Sbjct: 758 PPPPPPPPGG 767
Score = 25.8 bits (54), Expect(2) = 0.37
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 463 PPPPPPPXG 437
PPPPPPP G
Sbjct: 726 PPPPPPPGG 734
Score = 25.4 bits (53), Expect(2) = 0.37
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 460 PPPPPPXGG 434
PPPPPP GG
Sbjct: 742 PPPPPPPGG 750
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 463 PPPPPPPXGGXXXG 422
PPPPPPP GG G
Sbjct: 353 PPPPPPPPGGFKGG 366
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 463 PPPPPPPXGG 434
PPPPPPP GG
Sbjct: 341 PPPPPPPPGG 350
Score = 25.8 bits (54), Expect(2) = 0.37
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 463 PPPPPPPXG 437
PPPPPPP G
Sbjct: 309 PPPPPPPGG 317
Score = 25.4 bits (53), Expect(2) = 0.37
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 460 PPPPPPXGG 434
PPPPPP GG
Sbjct: 325 PPPPPPPGG 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 25.8 bits (54), Expect(2) = 2.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 463 PPPPPPPXG 437
PPPPPPP G
Sbjct: 258 PPPPPPPKG 266
Score = 22.6 bits (46), Expect(2) = 2.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 457 PPPPPXGG 434
PPPPP GG
Sbjct: 301 PPPPPAGG 308
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 25.8 bits (54), Expect(2) = 2.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 463 PPPPPPPXG 437
PPPPPPP G
Sbjct: 243 PPPPPPPKG 251
Score = 22.6 bits (46), Expect(2) = 2.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 457 PPPPPXGG 434
PPPPP GG
Sbjct: 286 PPPPPAGG 293
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 25.8 bits (54), Expect(2) = 2.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 463 PPPPPPPXG 437
PPPPPPP G
Sbjct: 237 PPPPPPPKG 245
Score = 22.6 bits (46), Expect(2) = 2.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 457 PPPPPXGG 434
PPPPP GG
Sbjct: 280 PPPPPAGG 287
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 463 PPPPPPPXGG 434
PPPPPPP GG
Sbjct: 589 PPPPPPPPGG 598
Score = 24.6 bits (51), Expect(2) = 3.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 463 PPPPPPPXGG 434
PPPPPP GG
Sbjct: 579 PPPPPPMLGG 588
Score = 23.4 bits (48), Expect(2) = 3.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 460 PPPPPPXGGXXXG 422
PPPPPP G G
Sbjct: 589 PPPPPPPPGGLMG 601
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 463 PPPPPPPXGGXXXGXKK 413
PPPPPPP G G KK
Sbjct: 54 PPPPPPPMCGCGCGRKK 70
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 463 PPPPPPPXGG 434
PPPPPPP GG
Sbjct: 40 PPPPPPPCGG 49
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 463 PPPPPPPXGG 434
PPPPPPP GG
Sbjct: 809 PPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 463 PPPPPPPXGG 434
PPPPPPP GG
Sbjct: 809 PPPPPPPPGG 818
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 463 PPPPPPPXGG 434
PPPPPPP GG
Sbjct: 331 PPPPPPPIGG 340
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 463 PPPPPPPXGG 434
PPPPPPP GG
Sbjct: 63 PPPPPPPCGG 72
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 459 PXPPPXGGGXXXGGKK 412
P PPP GGG GG+K
Sbjct: 65 PPPPPCGGGCGCGGRK 80
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 463 PPPPPPPXGGXXXGXKK 413
PPPPPP GG G +K
Sbjct: 45 PPPPPPVCGGCGCGGRK 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,665,355
Number of Sequences: 27780
Number of extensions: 85944
Number of successful extensions: 1862
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1458
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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