Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_P15
(873 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0375 - 21620074-21620115,21620223-21620333,21621009-216211... 111 7e-25
06_03_1200 - 28352647-28352712,28353097-28353216,28353314-283534... 37 0.018
06_03_0920 - 25942515-25942772,25944186-25944248,25944358-259444... 36 0.056
07_03_1293 - 25563431-25563545,25564078-25564196,25564300-255644... 30 2.1
07_03_1452 - 26629219-26629428,26630113-26630280,26630363-266304... 29 3.7
02_01_0439 - 3183975-3183989,3184044-3184132,3184767-3184840,318... 29 6.4
01_01_0025 + 188915-189132,190625-190705,191350-191506,191958-19... 29 6.4
05_07_0182 + 28243881-28245406,28245460-28245505,28246309-282464... 28 8.5
03_03_0059 + 14149796-14150350,14152303-14152433,14153479-141535... 28 8.5
>01_05_0375 -
21620074-21620115,21620223-21620333,21621009-21621176,
21622364-21622471,21622593-21622694
Length = 176
Score = 111 bits (267), Expect = 7e-25
Identities = 66/167 (39%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Frame = +3
Query: 117 MVKIALQIKATLESIEKLYTNH----PHYQWFLKLKCGSCGEVSEKFHDLTEADKVPQKH 284
MV AL A L+++ L + P Y ++ KL+C +CGEVS K ++ + V +
Sbjct: 1 MVYYALYWWADLDNLTNLQPRYGCDDPTYPYYFKLRCENCGEVSAKATCVSLGEVVDLPN 60
Query: 285 NRSETNLLIKCKLCSRENSIDVIEGSNGKFTSDDGNK--FKTIVTFDCRGVEPVDFEPKS 458
RS NL+ KCKLC R+ SI +I G T + K ++ FDCRG EP+DF +
Sbjct: 61 GRSTANLVQKCKLCGRDASIVMIPGQGTPLTMEQSQKGDRTCLMVFDCRGCEPIDFAFGN 120
Query: 459 GWIAEAENNGKKFEDVDLTEKEWVDYDEKNQASVGVYELEWQFIKVK 599
GW AE+ G F D+D +E E+ DYDEK + VGV +L +F VK
Sbjct: 121 GWKAES-LEGTSF-DIDCSEGEFADYDEKGECPVGVGKLRSEFRVVK 165
>06_03_1200 -
28352647-28352712,28353097-28353216,28353314-28353466,
28354652-28354804,28354890-28354967
Length = 189
Score = 37.1 bits (82), Expect = 0.018
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 15/136 (11%)
Frame = +3
Query: 177 NHPHYQWFLKLKCGSCGEVSEKFHDLT----EADKVPQKHNR-----------SETNLLI 311
N P ++LKL C +CGE + + L +P N+ S ++
Sbjct: 17 NGPAAAYYLKLSCDTCGEPTTRDVCLVPGPDSCTNLPGIKNQWRYTCYPTCPDSGHVVVR 76
Query: 312 KCKLCSRENSIDVIEGSNGKFTSDDGNKFKTIVTFDCRGVEPVDFEPKSGWIAEAENNGK 491
KCK+CS S+ ++ G T+ ++ +G P +F P S W+A + G
Sbjct: 77 KCKVCSALGSVALLPGHGKALTTSSRTM---VMMLQSKGYTPTNFAPGSRWVA-TKVTGY 132
Query: 492 KFEDVDLTEKEWVDYD 539
+ E ++LT + YD
Sbjct: 133 RCE-LELTADHFKGYD 147
>06_03_0920 -
25942515-25942772,25944186-25944248,25944358-25944477,
25944628-25944780,25945591-25945692
Length = 231
Score = 35.5 bits (78), Expect = 0.056
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +3
Query: 297 TNLLIKCKLCSRENSIDVIEGSNGKFTSDDGNKFKTIVTFDCRGVEPVDFEPKSGWIAEA 476
T ++CK C S+ +I G T D N ++ C G P+ F P WIA
Sbjct: 29 TAYYLQCKDCGSLGSVSLIPGKGKALTPDSKNM---VMLIHCDGHIPIAFSPAPYWIANK 85
Query: 477 EN 482
N
Sbjct: 86 VN 87
>07_03_1293 -
25563431-25563545,25564078-25564196,25564300-25564467,
25564565-25564627,25564709-25564816,25565125-25565237,
25565313-25565609,25565724-25565802,25566116-25566224,
25566324-25566365,25567023-25567153,25568100-25568648
Length = 630
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Frame = +3
Query: 300 NLLIKCKLCSRENSIDVIEGSNGKFTSDDGN----KFKTIVTF-DCRGVEPVDFEPKSGW 464
N+ I +LC +D I GK++ DD + +V+F +GV D +P++ +
Sbjct: 221 NVYIVMELCEGGELLDRILSRGGKYSEDDAKAVLVQILNVVSFCHIQGVVHRDLKPEN-F 279
Query: 465 IAEAENNGKKFEDVDLTEKEWVDYDEKNQASVG 563
+ +++ + + +D ++V DE+ VG
Sbjct: 280 LFTSKDENSQLKAIDFGLSDFVKPDERLNDIVG 312
>07_03_1452 -
26629219-26629428,26630113-26630280,26630363-26630425,
26630499-26630606,26630820-26630932,26631026-26631322,
26631424-26631502,26631733-26631841,26631927-26631968,
26632467-26632597,26633482-26633623,26633713-26633828,
26634121-26634657
Length = 704
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Frame = +3
Query: 294 ETNLLIKCKLCSRENSIDVIEGSNGKFTSDDGN----KFKTIVTF-DCRGVEPVDFEPKS 458
E N+ I +LC +D I GK++ +D + ++V+F +GV D +P++
Sbjct: 301 EDNVYIVMELCKGGELLDRILARGGKYSEEDAKVVMVQILSVVSFCHLQGVVHRDLKPEN 360
Query: 459 GWIAEAENNGKKFEDVDLTEKEWVDYDEKNQASVG 563
++ +++ + +D ++V DE+ VG
Sbjct: 361 -FLFTSKDENSALKVIDFGLSDFVKPDERLNDIVG 394
>02_01_0439 -
3183975-3183989,3184044-3184132,3184767-3184840,
3184935-3185029,3185585-3185677,3185754-3185851,
3185947-3186044,3186912-3187159
Length = 269
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 484 LFSASAIHPDFGSKSTGSTPLQSNVTMVLNLFPSSLVNFPLLPSITSM 341
LFS S HP G + G + + + PSS FPLL +T +
Sbjct: 47 LFSHSIRHPLLGGQRDGGGKPRPTMQRLSRFVPSSSSVFPLLRRVTDL 94
>01_01_0025 +
188915-189132,190625-190705,191350-191506,191958-192161,
192248-192356,192401-192496,192724-193994,194200-194384,
194619-195055,197034-197077,197830-199036,199253-199479
Length = 1411
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +3
Query: 237 EKFHD-LTEADKVPQKHNRSETNLLIKCKLCSRE--NSIDVIEGSNG 368
E HD + + VP++HN S+ L+ C L E +S D++ S+G
Sbjct: 634 ESHHDAIGDHSSVPREHNNSQLLALVNCSLRLSELAHSYDLLAVSHG 680
>05_07_0182 +
28243881-28245406,28245460-28245505,28246309-28246400,
28246513-28246635,28246753-28246984
Length = 672
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 354 EGSNGKFTSDDG-NKFKTIVTFDCRGVEPVDFEPKSGWIAEAENNGKKFEDVDLTEKEWV 530
EGS+ + D+G + + +++ G D+ GW+ E +++ FED D + + V
Sbjct: 421 EGSDVEDDEDEGLSDMEDLISEISGGKSDTDYHWGDGWVGENDDSPPDFEDDDGSSLKEV 480
Query: 531 DYDEKNQAS 557
K A+
Sbjct: 481 KVTMKKTAN 489
>03_03_0059 +
14149796-14150350,14152303-14152433,14153479-14153520,
14153632-14153740,14154262-14154340,14154437-14154733,
14154820-14154932,14155375-14155482,14155554-14155616,
14155698-14155865,14156283-14156348
Length = 576
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +3
Query: 294 ETNLLIKCKLCSRENSIDVIEGSNGKFTSDDG----NKFKTIVTF-DCRGVEPVDFEPKS 458
E N+ I +LC +D I GK++ +D + ++ +F +GV D +P++
Sbjct: 221 EENVYIVMELCKGGELLDRILARGGKYSEEDAKVVMRQILSVASFCHLQGVVHRDLKPEN 280
Query: 459 GWIAEAENNGKKFEDVDLTEKEWVDYDEKNQASVG 563
++ +++ + +D ++V DE+ VG
Sbjct: 281 -FLFSSKDENSAMKVIDFGLSDFVKPDERLNDIVG 314
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,751,483
Number of Sequences: 37544
Number of extensions: 282886
Number of successful extensions: 730
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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