Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P15
         (873 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   4.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.4  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 153 ESIEKLYTNHPHYQWFLKLK 212
           E + ++  +HP Y WF KL+
Sbjct: 250 ELVLEVPLSHPTYDWFEKLE 269


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 397 NLFPSSLVNFPLLPSITSMLFSLEQSLHFISKLVSD 290
           ++ P   +   +L +     ++L QSLHF+   +S+
Sbjct: 10  DILPGITIGVHILDTCGRDTYALNQSLHFVRASLSN 45


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 397 NLFPSSLVNFPLLPSITSMLFSLEQSLHFISKLVSD 290
           ++ P   +   +L +     ++L QSLHF+   +S+
Sbjct: 100 DILPGITIGVHILDTCGRDTYALNQSLHFVRASLSN 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,788
Number of Sequences: 438
Number of extensions: 3327
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)