Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_P14
(899 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 93 1e-17
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 74 6e-12
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 60 6e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 47 8e-04
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.049
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.086
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 38 0.46
UniRef50_A7NRE3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 35 2.5
UniRef50_Q2JIB1 Cluster: TonB family protein; n=2; Synechococcus... 35 2.5
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.7
UniRef50_Q0RU15 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.7
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_Q0SFZ7 Cluster: Possible secreted protein; n=2; Nocardi... 33 7.5
UniRef50_Q09CP7 Cluster: TonB protein; n=2; Cystobacterineae|Rep... 33 7.5
UniRef50_A1WXA2 Cluster: VanZ family protein precursor; n=1; Hal... 33 7.5
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 92.7 bits (220), Expect = 1e-17
Identities = 67/137 (48%), Positives = 74/137 (54%)
Frame = +3
Query: 381 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 560
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 561 GTVKRPRCWRFP*APPPLTSITKIDAQVRGGETRQDYKXTRRFPPGNXPGALSCXRPCPF 740
RPR RF PLTSI K DAQ+ GGETRQDYK RRFP AL PF
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLF---LPF 130
Query: 741 TGIPVRLSPFGXRGXSF 791
G+PV +G RG SF
Sbjct: 131 -GLPVSFRCYG-RGFSF 145
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 73.7 bits (173), Expect = 6e-12
Identities = 49/116 (42%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +3
Query: 549 SKRPGTVKRPRCWRFP*APPPLTSITKIDAQVRGGETRQDYKXTRRFPPGNXPGALSCXR 728
SK+ T R RF PLTSITKIDAQVRGGETRQDYK TRRFP P R
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL-EAPSCALLFR 60
Query: 729 PCPFTGIPVRLSPFGXRGXSFSXLTXXVS-QFRCXXXRXNLGCXXKPPV*PDRWPY 893
PC +P PF R + V RC + PP P PY
Sbjct: 61 PC---RLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPY 113
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -1
Query: 557 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 444
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 60.5 bits (140), Expect = 6e-08
Identities = 29/42 (69%), Positives = 31/42 (73%)
Frame = +3
Query: 567 VKRPRCWRFP*APPPLTSITKIDAQVRGGETRQDYKXTRRFP 692
V+ PR RF PLTSITK DAQ+ GGETRQDYK TRRFP
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFP 85
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 357 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 524
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 46.8 bits (106), Expect = 8e-04
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 456 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFP*APPPLTSITK 629
C R Q R G +P+N I +R + + + P T FP PPLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 630 IDAQVRGGETRQDYKXTRRFP 692
I Q + +T+ +YK T FP
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFP 102
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 476 HSKAVIRLSTESGDNAGKNM 535
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.049
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 355 SALMNRPTRGERRFAYW 405
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 427 ERGSGRAPNTQTASPRALADSLMQ 356
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 37.5 bits (83), Expect = 0.46
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 169 MIRYIDEFGQTTTRMQ 216
MIRYIDEFGQTTTRMQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
>UniRef50_A7NRE3 Cluster: Putative uncharacterized protein; n=1;
Roseiflexus castenholzii DSM 13941|Rep: Putative
uncharacterized protein - Roseiflexus castenholzii DSM
13941
Length = 239
Score = 35.9 bits (79), Expect = 1.4
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 622 SQKSTLKSEVAKPDRTIXIPGVSPLETPPVRSPVXDPAXLP 744
+ + T+ S + P T P V LE PPVR+PV PA P
Sbjct: 169 TSQPTVTSTIGTPTATFQPPPVRTLEPPPVRTPVLPPALPP 209
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 35.1 bits (77), Expect = 2.5
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +1
Query: 697 ETPPVRSPVXDPAXLPXYLSAFLPSGSVVXLFHXSRXXXLNSGVXXSAPTWAVXXNPPFN 876
E+ P+ +PA + F +GSV L H S +++ AP+WAV NPPF+
Sbjct: 40 ESLPLALSCSNPAVSRIPVPPFSLAGSVA-LSHSSHSG-ISARCRSFAPSWAVSKNPPFS 97
Query: 877 PT 882
PT
Sbjct: 98 PT 99
Score = 33.5 bits (73), Expect = 7.5
Identities = 29/85 (34%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = +3
Query: 642 VRGGETRQDYKXTRRFPPGNXPGALSCXRPCPFTGIPVRLSPFGXRG-XSFSXLTXXVSQ 818
VR GETRQD K + P ALSC P + IPV PF G + S +
Sbjct: 23 VRSGETRQDLKII-TVSDESLPLALSCSNPA-VSRIPV--PPFSLAGSVALSHSSHSGIS 78
Query: 819 FRCXXXRXNLGCXXKPPV*PDRWPY 893
RC + PP P PY
Sbjct: 79 ARCRSFAPSWAVSKNPPFSPTAAPY 103
>UniRef50_Q2JIB1 Cluster: TonB family protein; n=2;
Synechococcus|Rep: TonB family protein - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 443
Score = 35.1 bits (77), Expect = 2.5
Identities = 24/87 (27%), Positives = 31/87 (35%)
Frame = +1
Query: 607 PP*RASQKSTLKSEVAKPDRTIXIPGVSPLETPPVRSPVXDPAXLPXYLSAFLPSGSVVX 786
PP + T K E +P +P TPP + P PA P + L S V
Sbjct: 215 PPPTPTPIPTAKPEPTPTPPLTPLPTATPQPTPPPQQPTPTPAVTPTSTATPLTSAPVTS 274
Query: 787 LFHXSRXXXLNSGVXXSAPTWAVXXNP 867
R L G+ S T A +P
Sbjct: 275 STPLPRFTPLIQGIRSSVKTAAAPPSP 301
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 34.3 bits (75), Expect = 4.3
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = +1
Query: 709 VRSPVXDPAXLPXYLSAFLPSGSVVXLFHXSRXXXLNS 822
+RSPV L YLSAFLPSGSV L H SR L+S
Sbjct: 1 MRSPVPT-LPLTGYLSAFLPSGSVA-LSHSSRCRYLSS 36
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 566 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 444
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_Q0RU15 Cluster: Putative uncharacterized protein; n=1;
Frankia alni ACN14a|Rep: Putative uncharacterized
protein - Frankia alni (strain ACN14a)
Length = 208
Score = 33.9 bits (74), Expect = 5.7
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = -2
Query: 754 TGXPVXGQGRXQESAPGXFPGGKRLVXL*SCRVSPPLT*ASIFVMLVRGGGAYG 593
T V QGR Q + SC PPL+ S F LVRGGG G
Sbjct: 137 TANAVFDQGRVQREIAAQVKSQSGVTVKVSCPKDPPLSAGSTFRCLVRGGGGAG 190
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 238 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 405
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.7
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 318 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 154
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q0SFZ7 Cluster: Possible secreted protein; n=2;
Nocardiaceae|Rep: Possible secreted protein -
Rhodococcus sp. (strain RHA1)
Length = 200
Score = 33.5 bits (73), Expect = 7.5
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = +1
Query: 667 TIXIPGVSPLETPPVRSPVXDPAXLPXYLSAFLPSGSVVXLFHXSRXXXLNSGVXXSAPT 846
T +PGV P+ PP +P +PA LP L LP+ + H ++ S
Sbjct: 49 TFEVPGVPPV--PPAPAPAPNPAPLPGPLPGPLPAPPALPSTHGAQALAAAESKIGSPYV 106
Query: 847 WAVXXNPPFNPTG 885
W F+ +G
Sbjct: 107 WGATGPNAFDCSG 119
>UniRef50_Q09CP7 Cluster: TonB protein; n=2; Cystobacterineae|Rep:
TonB protein - Stigmatella aurantiaca DW4/3-1
Length = 250
Score = 33.5 bits (73), Expect = 7.5
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +1
Query: 607 PP*RASQKSTLKSEVAKPDRTIXIPGVSPLETPPVRSPVXDP 732
PP + K+T K V KPD I P P E PP + PV +P
Sbjct: 69 PPAASKPKTTPKKPVKKPD-VIVQPKEIPQEKPPEQEPVEEP 109
>UniRef50_A1WXA2 Cluster: VanZ family protein precursor; n=1;
Halorhodospira halophila SL1|Rep: VanZ family protein
precursor - Halorhodospira halophila (strain DSM 244 /
SL1) (Ectothiorhodospirahalophila (strain DSM 244 /
SL1))
Length = 1131
Score = 33.5 bits (73), Expect = 7.5
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 602 SLWKTPATRPFYGSWPFAGLLLTCSFL-RYPLILWITVLPPL 480
++W P + W AGLL+ L RYPL W+ VLPPL
Sbjct: 512 AIWLAAWAWPAWPGWLAAGLLIYAVLLWRYPLA-WLWVLPPL 552
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,647,462
Number of Sequences: 1657284
Number of extensions: 14226228
Number of successful extensions: 34586
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 33024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34550
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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