Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P13
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0403 + 3179513-3179570,3181576-3181737,3182721-3182920          112   3e-25

>05_01_0403 + 3179513-3179570,3181576-3181737,3182721-3182920
          Length = 139

 Score =  112 bits (270), Expect = 3e-25
 Identities = 55/93 (59%), Positives = 64/93 (68%)
 Frame = +2

Query: 452 RTMFIQTQDTPNPNSLKFLPGTKVLEPGQTLDFPNIGAAHCSPLAKMLFRIDGVKAVFFG 631
           R MFIQTQ TPNP SL F PG  V+E G + DFPN   A  SPLAK LF IDGV  VFFG
Sbjct: 23  RGMFIQTQSTPNPQSLMFYPGKPVMEVGSS-DFPNARTAMTSPLAKALFAIDGVTRVFFG 81

Query: 632 PEFITVTKQDDDVDWKLLKPEIFGTIMDXFASG 730
            +F+TVTK  ++  W  LKPE+F  IMD ++SG
Sbjct: 82  SDFVTVTK-SEETSWDYLKPEVFAVIMDFYSSG 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,323,618
Number of Sequences: 37544
Number of extensions: 318679
Number of successful extensions: 623
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)