Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P13
         (883 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   4.0  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   5.3  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   5.3  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 270 KLLKQLKLCYERHYAF*KVVNSATVYY-SHQLY 365
           K LK++K    RHY   +   S ++Y+ +H LY
Sbjct: 412 KRLKRVKRAAYRHYQTRRCQRSRSIYFDTHSLY 444


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +2

Query: 314  FLKSSKQCNRVLFASTLQRQTRKYHGLSGILKSDIPQ 424
            +++S+ +C++ L  S L       H + GI+  D+ Q
Sbjct: 1972 YVRSTHECSQQLVGSALSVLWMVVHSVHGIMFKDLKQ 2008


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 249 SNDSIIMLLFQSKLVRVRNTVIRTRCQVKILKIKSAFN 136
           + D+I  +L  +   R RN      C V  L +K+AFN
Sbjct: 523 TTDAIEKVLSIASASRARNRGANRFCAVVTLDVKNAFN 560


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,840
Number of Sequences: 2352
Number of extensions: 14767
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)