Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P12
         (891 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    25   1.1  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   3.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   4.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.6  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.8  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -3

Query: 679 DIHPFLATKFRSAGVLKTATALPAVSTKEPAMYPYVVFIR 560
           DI+P L T    A        L   S K+P MY  VV +R
Sbjct: 545 DINPSLCTHIIYAFATLKDHKLAEASDKDPEMYDRVVALR 584


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 252 IRDNIINSENVYVYFNRI 199
           +  N+I  +N  +YFNRI
Sbjct: 137 LEHNLIRLKNCVIYFNRI 154


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +1

Query: 325 KLCGQKLCTRTSNKGRYTLTTHTSGETH 408
           KLCG K+  +     R      TS  TH
Sbjct: 366 KLCGMKIVKKRRKDKREITRKSTSSSTH 393


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +3

Query: 534 HLWPQYVKERIKTTYGYIAGSLVLTAGSAVAVFRT 638
           H W +    + KT Y Y +   V+  G     FRT
Sbjct: 227 HKWKKNDSSKKKTRYYYRSVDDVIEKGKRPGAFRT 261


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/33 (27%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +1

Query: 187 RKNLNPVEINVYVFRINYVITNVYRS--LGVQC 279
           RKN+  + +    FR  Y + N++ +  +G+ C
Sbjct: 53  RKNVQEIRLEWKSFRFVYAVYNIFGAFVMGLFC 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,286
Number of Sequences: 336
Number of extensions: 4755
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)