Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P12
         (891 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88168-4|AAC24402.1|  342|Caenorhabditis elegans Hypothetical pr...   105   3e-23
Z81118-9|CAM84694.1|  208|Caenorhabditis elegans Hypothetical pr...    33   0.27 
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U21323-2|AAM22051.1|  155|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U21323-1|AAM22050.1|  542|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha...    29   3.4  
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha...    29   3.4  

>U88168-4|AAC24402.1|  342|Caenorhabditis elegans Hypothetical
           protein K11H12.8a protein.
          Length = 342

 Score =  105 bits (253), Expect = 3e-23
 Identities = 50/101 (49%), Positives = 67/101 (66%)
 Frame = +3

Query: 513 QVLFRESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVAVFRTPALLNLVARNGWMSIIVT 692
           Q + ++S +WP YV+ERI TTY Y+AGSL LTA S VA  R+ A++ L A  G MS+  T
Sbjct: 96  QSILQKSAIWPSYVRERISTTYAYLAGSLALTAVSGVAASRSAAIMRLTAGGGMMSLFGT 155

Query: 693 LGLMIGSGMVVRGMEYTPGFGAKQLAWMAHTGIMGAVIAPI 815
           +  MI SGM+ R ++Y     AK LAW  H G++GAV AP+
Sbjct: 156 MAAMIASGMLARSIDYESTV-AKHLAWALHCGVLGAVFAPL 195


>Z81118-9|CAM84694.1|  208|Caenorhabditis elegans Hypothetical
           protein T10G3.8 protein.
          Length = 208

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 311 NFVPRNYVVRNYAREPRTRVATRSQPTLRERLMAP 415
           + VP+N V +N + +PR RV TR  P+   +L  P
Sbjct: 119 SLVPKNEVKKNASPQPRVRVITRKSPSPLRKLSTP 153


>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
            K08C7.3b protein.
          Length = 3672

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 680  GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSIC 573
            GHP IS      C C+ N+N T S S H  + D  +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961


>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
            K08C7.3a protein.
          Length = 3704

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 680  GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSIC 573
            GHP IS      C C+ N+N T S S H  + D  +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961


>U21323-2|AAM22051.1|  155|Caenorhabditis elegans Hypothetical
           protein C45G9.6b protein.
          Length = 155

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 253 VYRSLGVQCNADSKIASTTKFCTEKLCGQKLCTRTSNKG 369
           V R  G  CN+++   S   +CT  + G K+C  TSN G
Sbjct: 58  VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95


>U21323-1|AAM22050.1|  542|Caenorhabditis elegans Hypothetical
           protein C45G9.6a protein.
          Length = 542

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 253 VYRSLGVQCNADSKIASTTKFCTEKLCGQKLCTRTSNKG 369
           V R  G  CN+++   S   +CT  + G K+C  TSN G
Sbjct: 58  VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95


>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
            chain protein.
          Length = 3704

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 680  GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSIC 573
            GHP IS      C C+ N+N T S S H  + D  +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961


>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
            protein.
          Length = 3704

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 680  GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSIC 573
            GHP IS      C C+ N+N T S S H  + D  +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,148,434
Number of Sequences: 27780
Number of extensions: 427871
Number of successful extensions: 1183
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)