Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P10
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46242-14|CAA86324.2|  442|Caenorhabditis elegans Hypothetical p...    30   1.9  

>Z46242-14|CAA86324.2|  442|Caenorhabditis elegans Hypothetical
           protein F35G12.1a protein.
          Length = 442

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -2

Query: 194 IPSPWKSIVNI*LSTYFIRKIGTRLRDSNTGASLHTNAPVVLSFRPQRLQNLK---EFPI 24
           I S    +  I L    I+K+ T+L+      + H+    +  FRP  ++NLK   E+P 
Sbjct: 249 ITSTQPGLSGIDLGNMLIKKVATKLQKDVPSVTTHSTLSPIPGFRPWLIRNLKGNSEYPS 308

Query: 23  V 21
           +
Sbjct: 309 I 309


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,240,043
Number of Sequences: 27780
Number of extensions: 312989
Number of successful extensions: 673
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)