Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P09
         (903 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      27   0.27 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      27   0.27 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    26   0.35 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    26   0.35 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    26   0.35 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    26   0.35 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    26   0.35 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           26   0.35 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    26   0.35 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    26   0.35 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    24   1.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   4.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   7.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   7.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +3

Query: 309 PDGKFGIPQKAIDSVNANKIGLKGPLMTPVGKG 407
           P    GIP   +DS  A  +GL  P M P   G
Sbjct: 138 PPAHMGIPPYQLDSKTAGSMGLTRPPMYPFPAG 170


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +3

Query: 309 PDGKFGIPQKAIDSVNANKIGLKGPLMTPVGKG 407
           P    GIP   +DS  A  +GL  P M P   G
Sbjct: 30  PPAHMGIPPYQLDSKTAGSMGLTRPPMYPFPAG 62


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 738 ELATKYPGHQVRRAIPGHGL-PXHGXXTR 821
           ++A +YP H      PGHGL P  G  T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQ 75


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 738 ELATKYPGHQVRRAIPGHGL-PXHGXXTR 821
           ++A +YP H      PGHGL P  G  T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQ 75


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 738 ELATKYPGHQVRRAIPGHGL-PXHGXXTR 821
           ++A +YP H      PGHGL P  G  T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQ 75


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 738 ELATKYPGHQVRRAIPGHGL-PXHGXXTR 821
           ++A +YP H      PGHGL P  G  T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQ 75


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 738 ELATKYPGHQVRRAIPGHGL-PXHGXXTR 821
           ++A +YP H      PGHGL P  G  T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQ 75


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 738 ELATKYPGHQVRRAIPGHGL-PXHGXXTR 821
           ++A +YP H      PGHGL P  G  T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQ 75


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 738 ELATKYPGHQVRRAIPGHGL-PXHGXXTR 821
           ++A +YP H      PGHGL P  G  T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQ 75


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 738 ELATKYPGHQVRRAIPGHGL-PXHGXXTR 821
           ++A +YP H      PGHGL P  G  T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQ 75


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = +3

Query: 750 KYPGHQVRRAIPGHGL-PXHGXXTR 821
           +YP H      PGHGL P  G  T+
Sbjct: 7   QYPQHPYAAPAPGHGLQPTMGDYTQ 31


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 21/82 (25%), Positives = 38/82 (46%)
 Frame = -3

Query: 757 GYLVASSRQQRRKRPSDIRIILALCTAVTFFLLFSLANWKANSATLVLASSVISLMDCTT 578
           G+L   S Q+ +K   ++ I   +C  +   +LFSL+       T  L S+ I + +   
Sbjct: 26  GFLPVCSSQKGQKTCLNLSINYCICGYIFSAILFSLS---ILGLTEDLNSAPIRMKNPIV 82

Query: 577 PSTISCSIPEYSPSVFSLIVTT 512
              I   + E + +V + I+TT
Sbjct: 83  KYIILIDLGEVAVTVLAGILTT 104


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 659 VFSGELEGELRHSRTGLLRDQL 594
           VFSGEL   L+  R G+ R  +
Sbjct: 468 VFSGELPVFLQEHRNGMYRPSI 489


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 659 VFSGELEGELRHSRTGLLRDQL 594
           VFSGEL   L+  R G+ R  +
Sbjct: 468 VFSGELPVFLQEHRNGMYRPSI 489


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,219
Number of Sequences: 336
Number of extensions: 3969
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)