Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_P09
(903 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC902.05c |idh2|glu2|isocitrate dehydrogenase |Schizosaccharom... 252 4e-68
SPAC11G7.03 |idh1|glu3|isocitrate dehydrogenase |Schizosaccharom... 208 1e-54
SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces ... 108 9e-25
SPBC1A4.02c |leu1|SPBC1E8.07c|3-isopropylmalate dehydrogenase Le... 44 3e-05
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.68
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 29 1.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.8
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.6
SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces pomb... 27 3.6
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 27 3.6
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 27 4.8
SPAC23D3.08 |usp108||U1 snRNP-associated protein Usp108|Schizosa... 26 8.4
SPAC6B12.10c |spp1|pri1|DNA primase catalytic subunit Spp1 |Schi... 26 8.4
SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces pombe... 26 8.4
>SPBC902.05c |idh2|glu2|isocitrate dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 252 bits (618), Expect = 4e-68
Identities = 125/218 (57%), Positives = 156/218 (71%), Gaps = 5/218 (2%)
Frame = +3
Query: 144 ATRAGAAQY-----STGVRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRG 308
+T+A A Y + G VT+I G GIGPEI +V++IF+AAKVPIEWE V V +
Sbjct: 28 STKAAAGTYEGVKNANGNYTVTMIAGDGIGPEIAQSVERIFKAAKVPIEWERVKVYPIL- 86
Query: 309 PDGKFGIPQKAIDSVNANKIGLKGPLMTPVGKGYRSLNLALRKEFDLYANVRPCKSLEGI 488
+G IP A +SV NK+ LKGPL TP+GKG+ S+NL LR+ F L+ANVRPC S+ G
Sbjct: 87 KNGTTTIPDDAKESVRKNKVALKGPLATPIGKGHVSMNLTLRRTFGLFANVRPCVSITGY 146
Query: 489 KTLYDNVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITEEASTRVAEFAFQFARENKRK 668
KT YDNV+ V IRENTEGEYSGIEHE++ GVVQSIKLIT AS RV +AFQ+AR+ +
Sbjct: 147 KTPYDNVNTVLIRENTEGEYSGIEHEVIPGVVQSIKLITRAASERVIRYAFQYARQTGKN 206
Query: 669 KVTAVHKANIMRMSDGLFLRCCRELATKYPGHQVRRAI 782
+T VHKA IMRM+DGLFL C +ELA +YP ++R I
Sbjct: 207 NITVVHKATIMRMADGLFLECAKELAPEYPDIELREEI 244
>SPAC11G7.03 |idh1|glu3|isocitrate dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 208 bits (507), Expect = 1e-54
Identities = 106/195 (54%), Positives = 138/195 (70%), Gaps = 2/195 (1%)
Frame = +3
Query: 177 GVRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDGKFGIP-QKAIDSV 353
G VTLIPG GIG E + AV +IF+ A VPIE+EE+DVT + + G +AI S+
Sbjct: 19 GKYTVTLIPGDGIGRETSNAVTEIFKTANVPIEFEEIDVTGMEKNNKSSGDALHEAIQSL 78
Query: 354 NANKIGLKGPLMTPVGKG-YRSLNLALRKEFDLYANVRPCKSLEGIKTLYDNVDVVTIRE 530
NK+GLKG L TP KG + S N+ALRKE D+YA++ K++ G KT +DNVD IRE
Sbjct: 79 KRNKVGLKGILFTPFEKGGHTSFNVALRKELDIYASLVLIKNIPGFKTRHDNVDFAIIRE 138
Query: 531 NTEGEYSGIEHEIVDGVVQSIKLITEEASTRVAEFAFQFARENKRKKVTAVHKANIMRMS 710
NTEGEYSG+EH+ V GVV+S+K+ITE S R+A+FAF FA +N RK VT +HKANIM+++
Sbjct: 139 NTEGEYSGLEHQSVPGVVESLKIITEYKSKRIAQFAFDFALQNGRKSVTCIHKANIMKLA 198
Query: 711 DGLFLRCCRELATKY 755
DGLF R ++A Y
Sbjct: 199 DGLFRRTFYDVANGY 213
>SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 362
Score = 108 bits (260), Expect = 9e-25
Identities = 74/213 (34%), Positives = 118/213 (55%), Gaps = 23/213 (10%)
Frame = +3
Query: 195 LIPGHGIGPEITVAVQKIFE--AAKVPIEWEEVDVTAVRGPDGKFG--IPQKAIDSVNAN 362
LIP GIG E+ A +++ E AK ++++ +D+ A G + G +P++ ++ +
Sbjct: 11 LIPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTE 70
Query: 363 -KIGLKGPLMTPVGK--GYRSLNLALRKEFDLYANVRPCKSLEGIKTLYDNVDVVTIREN 533
L G + +P K GY S +ALRK+ LYANVRP KSL+G K VD+V +REN
Sbjct: 71 CNAALFGAVQSPTHKVAGYSSPIVALRKKMGLYANVRPVKSLDGAKG--KPVDLVIVREN 128
Query: 534 TEGEYSGIEHEIVD----GVVQSIKLITEEASTRVAEFAFQFARE------------NKR 665
TE Y E + + V ++I+ I+EEAST++ + AF+ A+ +K+
Sbjct: 129 TECLYVKEERMVQNTPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKK 188
Query: 666 KKVTAVHKANIMRMSDGLFLRCCRELATKYPGH 764
VT +HK+N+M ++DGLF CR + P +
Sbjct: 189 PLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSY 221
>SPBC1A4.02c |leu1|SPBC1E8.07c|3-isopropylmalate dehydrogenase
Leu1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 371
Score = 44.0 bits (99), Expect = 3e-05
Identities = 57/196 (29%), Positives = 84/196 (42%), Gaps = 20/196 (10%)
Frame = +3
Query: 183 RKVTLIPGHGIGPEITVA---VQKIFEAAKVPIEWEEVDVTAVRGPDGKFGIP-----QK 338
+K+ ++PG IGPEI + V K+ E + ++ E + +G P K
Sbjct: 4 KKIVVLPGDHIGPEIVASALEVLKVVEKKRPELKLEFEEHKIGGASIDAYGTPLTDETVK 63
Query: 339 AIDSVNANKIG-LKGPLMT-PVGKGYRSLNLALRKEFDLYANVRPC----KSLEGIKTL- 497
A + +G + GP T P + + L L LRK ++AN+RPC KSL L
Sbjct: 64 ACLEADGVLLGAVGGPEWTNPNCRPEQGL-LKLRKSMGVWANLRPCNFASKSLVKYSPLK 122
Query: 498 ---YDNVDVVTIRENTEGEYSGIEHE-IVDGVVQSIKLITEEASTRVAEFAFQFAR-ENK 662
+ VD +RE T G Y G E G + E +R+A A A N
Sbjct: 123 PEIVEGVDFCVVRELTGGCYFGERTEDNGSGYAMDTWPYSLEEVSRIARLAAWLAETSNP 182
Query: 663 RKKVTAVHKANIMRMS 710
VT + KAN++ S
Sbjct: 183 PAPVTLLDKANVLATS 198
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.5 bits (63), Expect = 0.68
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 461
NS+T + +S+V++ +TP T S + +P S +V TST YSVL S +
Sbjct: 547 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTSTPITRYSVLNSSTPITSS 603
Query: 460 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAVTS- 287
T+ S + L+ P+ + PI + S+ P S L + T
Sbjct: 604 TVLNSSTPITSSSVLNSSTPITSSTALNTSTPIT---SSSVLNSSTPITSSSVLNSSTPI 660
Query: 286 TSSHSIGT---LAASKIF*TATVIS 221
TSS ++ T + +S + ++T I+
Sbjct: 661 TSSTALNTSTPITSSSVLNSSTPIT 685
Score = 29.5 bits (63), Expect = 0.68
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 461
NS+T V +SSV++ +TP T S + +P S + TST S SVL S +
Sbjct: 3355 NSSTPVTSSSVLN---SSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 3411
Query: 460 TLAYKSNSFLRA-KLSDL*PLPTGVIRGPFKPILLA--FTESIAFWGIPNLPSGPLTAVT 290
T+ S + L+ P+ + + PI + S A L S T +T
Sbjct: 3412 TVVNSSTPITSSTALNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSS--TPIT 3469
Query: 289 STSSHSIGTLAASKIF*TATVISG 218
S+S + T +S T++V+ G
Sbjct: 3470 SSSVLNSSTPISSSTVITSSVVIG 3493
Score = 28.7 bits (61), Expect = 1.2
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 461
NS+T + +SS+++ +TP T S + +P S +V TST S SVL S +
Sbjct: 751 NSSTPITSSSILN---SSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSS 807
Query: 460 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAVTS- 287
T+ S + L+ P+ + + PI + ++ P S L + T
Sbjct: 808 TVLNSSTPITSSSVLNSSTPITSSTVVNTSTPIT---SSTVVNSSTPITSSSVLNSSTPI 864
Query: 286 TSSHSIGT---LAASKIF*TATVIS 221
TSS ++ T + +S + ++T I+
Sbjct: 865 TSSTALNTSTPITSSSVLNSSTPIT 889
Score = 28.7 bits (61), Expect = 1.2
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST-LSYSVLIPSKLLQGLT 458
NS+T + +S+V++ +TP T S + +P S +V TST ++ S ++ S +
Sbjct: 2251 NSSTPITSSTVVNT---STPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSS 2307
Query: 457 LAYKSNSFLRAK--LSDL*PLPTGVIRGPFKPI----LLAFTESIAFWGIPNLPSGPLTA 296
A +++ + + L+ P+ + + PI +L + I + N S P+T+
Sbjct: 2308 TALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVN-TSTPITS 2366
Query: 295 V----TSTSSHSIGTLAASKIF*TATVISGPIPCPGMSV 191
TSTS S L +S ++TV++ P SV
Sbjct: 2367 STALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSV 2405
Score = 28.3 bits (60), Expect = 1.6
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 461
NS+T + +S+V++ +TP T S + +P S +V TST S +V+ S +
Sbjct: 1147 NSSTPITSSTVVNT---STPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSS 1203
Query: 460 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAVTST 284
T+ S + L+ P+ + + PI + SI P S L + T
Sbjct: 1204 TVVNSSTPITSSTVLNTSTPITSSSVLNSSTPIT---SSSILNSSTPITSSSVLNSSTPI 1260
Query: 283 SSHSIGTLAASKIF*TATVISGPIPCPGMSV 191
+S ++ + +S ++T ++ IP SV
Sbjct: 1261 TSSTV--VNSSTPITSSTALNTSIPITSSSV 1289
Score = 28.3 bits (60), Expect = 1.6
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 461
NS+T + +SSV++ +TP T S + +P S +V TST S SVL S +
Sbjct: 3223 NSSTAITSSSVLN---SSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSS 3279
Query: 460 TLAYKS 443
T+ S
Sbjct: 3280 TVVNTS 3285
Score = 27.9 bits (59), Expect = 2.1
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Frame = -3
Query: 631 SATLVLASSVIS---LMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQ 467
S+T+V S+ I+ ++ +TP T S + +P S +V TST S +V+ S +
Sbjct: 2762 SSTVVNTSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPIT 2821
Query: 466 GLTLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAVT 290
T+ S + L+ P+ + PI + S+ P S L T
Sbjct: 2822 SSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPIT---SSSVLNSSTPITSSTALNTST 2878
Query: 289 STSSHSIGTLAASKIF*TATVISGPIPCPGMSV 191
S +S S+ L +S ++TV++ P SV
Sbjct: 2879 SITSSSV--LNSSTPITSSTVVNTSTPITSSSV 2909
Score = 27.1 bits (57), Expect = 3.6
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 461
NS+T + +S+V++ +TP T S + +P S +V TST S SVL S +
Sbjct: 1411 NSSTPITSSTVVNT---STPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSSTPITSS 1467
Query: 460 TLAYKS 443
T+ S
Sbjct: 1468 TVVNTS 1473
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 506
NS+T + +SSV++ +TP T S + +P S +V TST
Sbjct: 1987 NSSTPITSSSVLNT---STPITSSSVLNSSTPITSSTVVNTST 2026
Score = 26.6 bits (56), Expect = 4.8
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 461
NS+T + +S+V++ +TP T S + +P S +V TST S +V+ S + L
Sbjct: 2515 NSSTPITSSTVLN---SSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSL 2571
Query: 460 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAVTST 284
T S + L+ P+ + + PI + ++ P S L T
Sbjct: 2572 TALNSSTPITSSSVLNSSTPITSSTVVNTSTPIT---SSTVVNSSTPITSSTALNTSTPI 2628
Query: 283 SSHSI 269
+S S+
Sbjct: 2629 TSSSV 2633
Score = 26.6 bits (56), Expect = 4.8
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 461
NS+T + +SS+++ +TP T S + +P S + TST S SVL S +
Sbjct: 3127 NSSTPITSSSILN---SSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSS 3183
Query: 460 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAVTST 284
++ S + L+ P+ + PI + S+ S L + T
Sbjct: 3184 SIVNSSTPITSSSVLNSSTPITSSTTLNTSTPIT---SSSVLNSSTAITSSSVLNSSTPI 3240
Query: 283 SSHSIGTLAASKIF*TATVISGPIPCPGMSV 191
+S S+ L +S ++TV++ P SV
Sbjct: 3241 TSSSV--LNSSTPITSSTVVNTSTPITSSSV 3269
Score = 26.2 bits (55), Expect = 6.4
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 461
NS+T + +S+V++ +TP T S + +P S +V TST S +V+ S +
Sbjct: 1339 NSSTPITSSTVVN---SSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSS 1395
Query: 460 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPILLAFTESIAFWGIPNLPSGPLTAVTST 284
T+ S + L+ P+ + + PI T S + S + TST
Sbjct: 1396 TVLNSSTPITSSSVLNSSTPITSSTVVNTSTPI----TSSTVVNSSTPITSSTVVN-TST 1450
Query: 283 SSHSIGTLAASKIF*TATVISGPIPCPGMSV 191
S L +S ++TV++ P +V
Sbjct: 1451 PITSSSVLNSSTPITSSTVVNTSTPITSSTV 1481
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 506
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 1459 NSSTPITSSTVVNT---STPITSSTVVNSSTPITSSTVVNTST 1498
Score = 26.2 bits (55), Expect = 6.4
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST-LSYSVLIPSKLLQGLT 458
NS+T + +S+V++ +TP T S + +P S +V TST ++ S ++ S +
Sbjct: 2983 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSS 3039
Query: 457 LAYKSNSFLRAK--LSDL*PLPTGVIRGPFKPIL--LAFTESIAFWGIPNLPSGPLTAVT 290
A +++ + + L+ P+ + + PI A S L S TA+T
Sbjct: 3040 TALNTSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSS--TAIT 3097
Query: 289 STSSHSIGT-LAASKIF*TATVIS 221
S+S + T + +S + ++T I+
Sbjct: 3098 SSSIVNSSTPITSSSVLNSSTAIT 3121
Score = 25.8 bits (54), Expect = 8.4
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST--LSYSVLIPSKLLQGL 461
NS+T + +SS+++ +TP T S + +P S + TST S SVL S +
Sbjct: 415 NSSTPITSSSILN---SSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 471
Query: 460 TLAYKSNSFLRAK-LSDL*PLPTGVIRGPFKPIL--LAFTESIAFWGIPNLPSG-PLTAV 293
++ S + ++ P+ + + PI A S L S P+T+
Sbjct: 472 SVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 531
Query: 292 ----TSTSSHSIGTLAASKIF*TATVISGPIPCPGMSV 191
TSTS S L +S ++TV++ P SV
Sbjct: 532 TALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSV 569
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 506
N++T + +SSV++ +TP T S + +P S +V TST
Sbjct: 1327 NTSTPITSSSVLN---SSTPITSSTVVNSSTPITSSTVVNTST 1366
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 506
N++T + +SSV++ +TP T S + +P S +V TST
Sbjct: 2167 NTSTPITSSSVLN---SSTPITSSTVVNSSTPITSSTVVNTST 2206
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 506
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2179 NSSTPITSSTVVN---SSTPITSSTVVNTSTPITSSTVVNTST 2218
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 506
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2383 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTST 2422
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 506
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2659 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTST 2698
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 506
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2731 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTST 2770
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 506
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 2887 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTST 2926
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -3
Query: 634 NSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTST 506
NS+T + +S+V++ +TP T S + +P S +V TST
Sbjct: 3247 NSSTPITSSTVVNT---STPITSSSVLNSSTPITSSTVVNTST 3286
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 28.7 bits (61), Expect = 1.2
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 707 HTHNISFVYSRDLLPLVFSGELEGELR 627
HT+N+SF + P++ SG +G ++
Sbjct: 227 HTNNVSFAFFHSKFPIIISGSEDGTVK 253
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Frame = -3
Query: 634 NSATLVLASSVISLM----------DCTTPSTISCSIPEYSPSVFSLIVTTSTLSYSVLI 485
NS+TL+ ASS +L+ TT S IS ++P + S S + +STL+ S+ +
Sbjct: 737 NSSTLITASSSNTLLSSITSSSAIVSSTTVSNISSNLPSATASSQSQLTNSSTLATSLYL 796
Query: 484 PS 479
S
Sbjct: 797 SS 798
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 27.1 bits (57), Expect = 3.6
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = -3
Query: 637 ANSATLVLASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTSTLSYSVLIPS 479
++S++ ++ASS S M ++ S S S+P S S S +TTS LS S I S
Sbjct: 124 SSSSSSLVASSSSSGMSSSSLSH-SSSVPSSSSSYHSSSMTTSGLSSSASIVS 175
>SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = -3
Query: 556 IPEYSPSVFSLIVTTSTLSYSVLIPSKLLQGLTLAYKSNSFLRAKLSDL*PLPTGVI 386
IPEYS + + T+ +++ P+K + G + +N +L K++ LPTG I
Sbjct: 516 IPEYSKLNVTAVNLTNHSYWNLASPNKTIDGTIIKSTTNVYL--KVNSETSLPTGDI 570
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 15 RSHYREFLKILPPPPPFTASYRSS 86
R EF+ + P PPPF RS+
Sbjct: 1309 RQKLHEFMPVAPQPPPFIGESRSN 1332
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = -2
Query: 638 GELRHSRTGLLRDQLDGLHDPVDDLVLDTGILTLGVLSDRDHVNVV 501
GEL + + ++G HD + ++D+ + +++D DH+N+V
Sbjct: 848 GELIAVKQVEIPQTINGRHDQLRKDIVDSINAEISMIADLDHLNIV 893
>SPAC23D3.08 |usp108||U1 snRNP-associated protein
Usp108|Schizosaccharomyces pombe|chr 1|||Manual
Length = 382
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 616 LASSVISLMDCTTPSTISCSIPEYSPSVFSLIVTTSTLSYSVLIPS 479
LASS+ +L+ TP+ + + +V SLI+ + L + LIPS
Sbjct: 88 LASSIPALIKVVTPTKEEDASLNINLAVSSLILGSKVLIHQNLIPS 133
>SPAC6B12.10c |spp1|pri1|DNA primase catalytic subunit Spp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 454
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 323 EFAIWTPNSCYIHFLPFDRYFSCFEDFLN 237
EFA PN YI +L F + ++ LN
Sbjct: 66 EFAFTLPNDAYIRYLSFSNWEELKKEALN 94
>SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 513
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 686 VYSRDLLPLVFSGELEGELRHSRTGLLRD-QLDGLHD 579
++ R+LLP + +G G L S + RD +L+GL D
Sbjct: 201 LWKRNLLPQILAGCASGALIASLLSVYRDEELNGLFD 237
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,413,951
Number of Sequences: 5004
Number of extensions: 67954
Number of successful extensions: 289
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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