Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_P09
(903 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0320 - 2320317-2320336,2320791-2320902,2321092-2321236,232... 32 0.72
05_07_0105 - 27716126-27716218,27716548-27716658,27716764-277168... 31 1.7
01_01_1049 + 8275837-8275859,8276428-8276503,8276545-8276634,827... 30 2.9
05_05_0214 + 23319507-23321540 29 3.8
01_01_0789 + 6133239-6133656,6134128-6134141 29 3.8
01_06_1120 - 34645676-34645768,34645880-34645966,34646443-346465... 29 5.1
01_05_0490 + 22672241-22674679 29 5.1
05_05_0290 - 23879064-23880035 29 6.7
05_03_0557 - 15441039-15442730 29 6.7
04_04_1191 + 31599067-31600194 29 6.7
10_08_0949 - 21759821-21759833,21759985-21760301,21760650-217607... 28 8.8
07_01_0461 + 3492302-3492413,3492868-3492964,3493053-3493131,349... 28 8.8
06_01_0894 + 6853797-6853971,6855078-6855295,6856353-6856385,685... 28 8.8
05_05_0174 - 22960732-22960815,22960907-22961419,22961576-229620... 28 8.8
05_04_0337 - 20372378-20373094,20373320-20373379,20373992-203742... 28 8.8
03_06_0715 + 35693002-35694585 28 8.8
02_02_0017 - 6131265-6131284,6131654-6131774,6132011-6132146,613... 28 8.8
01_01_0274 - 2263304-2264211,2264490-2264673 28 8.8
>06_01_0320 -
2320317-2320336,2320791-2320902,2321092-2321236,
2321353-2321459,2321572-2321665,2321752-2321948,
2322311-2322382,2322504-2322618,2323060-2323176,
2323253-2323344,2323445-2323621,2323746-2323820,
2323911-2324051,2324671-2324859,2325298-2325363,
2325445-2325595,2325718-2325786,2326293-2326441,
2326526-2326657,2326756-2327081,2327167-2327203,
2327926-2327980,2328242-2328309,2328464-2328466
Length = 902
Score = 31.9 bits (69), Expect = 0.72
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -2
Query: 707 HTHNISFVYSRDLLPLVFSGELEGELR--HSRTGLLRDQLD 591
HTHNIS V LP++ +G +G +R HS T L + L+
Sbjct: 223 HTHNISAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLN 263
>05_07_0105 -
27716126-27716218,27716548-27716658,27716764-27716815,
27716895-27717034,27717298-27717422,27717514-27717638,
27717853-27717898,27718374-27718947
Length = 421
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 480 EGIKTLYDNVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITEEA-STRVAEFAFQFARE 656
E ++ L + D+V N +G+ IE EI+DGVV +++ + ST V + A +
Sbjct: 255 EALQKLNKHYDIVV---NIQGDEPLIEPEIIDGVVMALQRAPDAVFSTAVTALKPEDASD 311
Query: 657 NKRKKVTAVHKANIMRMSDGL 719
R K ++ + S GL
Sbjct: 312 TNRVKCVLDNQGYAIYFSRGL 332
>01_01_1049 +
8275837-8275859,8276428-8276503,8276545-8276634,
8276721-8276836,8276918-8277017,8277808-8277879,
8277954-8278001,8278093-8278170,8278272-8278391,
8278496-8278601,8279574-8279737,8280403-8280537,
8280766-8280896,8282016-8282094,8282284-8282373
Length = 475
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 596 LDGLHDPVDDLVLDTGILTLGVLSDRDHVNVV 501
L G+ PVDDL D ++ G++ D+D N+V
Sbjct: 47 LKGMGFPVDDLEFDPDLVIRGLIMDKDKGNLV 78
>05_05_0214 + 23319507-23321540
Length = 677
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 48 PPPPPFTASYRSSSQFAKILEMAARIIRKIVPA 146
PPPP ++SY SS+ +IL R+ R + A
Sbjct: 12 PPPPSSSSSYSSSASDGEILRSLHRLARDLAAA 44
>01_01_0789 + 6133239-6133656,6134128-6134141
Length = 143
Score = 29.5 bits (63), Expect = 3.8
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Frame = -3
Query: 727 RRKRPSDIRIILALCTAVTFFLLFSLANWKANSATLVLASSVISLMDCTTPSTISCSIP- 551
RR+ + ++L L A + L S + + SAT +L++ V +++ TT ++ S S P
Sbjct: 4 RRRSFPLVPLLLFLLAAAAYGRLISDGSPASASATSLLSNPVSAVIRLTTSNSASASSPP 63
Query: 550 -----EYSPSVFSLIVTTSTLSYSVLIPSKLLQGLTLAYKSNSFLRAKLSDL*P-LPTGV 389
E + + T+T+ ++ + L G L YK+ +FL A L + G+
Sbjct: 64 AAAPEEKCEQSYGFLPCTTTVLGNLFL--VLAYGF-LMYKAATFLSAGSELLLEIMGPGL 120
Query: 388 IRGPFKPILLAFTESI 341
+ G PIL A +++
Sbjct: 121 VGGLLLPILGALPDAL 136
>01_06_1120 -
34645676-34645768,34645880-34645966,34646443-34646508,
34647126-34647215,34647317-34647397,34647598-34647675,
34647788-34647878,34647969-34648110,34648479-34648590
Length = 279
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -2
Query: 323 EFAIWTPNSCYIHFLPFDRYFSCFEDFLNGDRDLGPNTMSRDERNLAHASAVLSSAGSGR 144
+FA+ TP S + LP ++ SC G+ + P T + + +L H V+ GR
Sbjct: 64 KFALPTPTS--VLGLPIGQHISCRGQDATGEEVIKPYTPTTLDSDLGHFELVIKMYPQGR 121
Query: 143 W-HNFPDYSCSHFKNFR 96
H+F + + + +
Sbjct: 122 MSHHFREMKVGDYMSVK 138
>01_05_0490 + 22672241-22674679
Length = 812
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 48 PPPPPFTASYR-SSSQFAKILEMAARIIRKIVP 143
PPPPP T S R +S + +L+ AR+ +P
Sbjct: 339 PPPPPLTRSRRWNSERLDAVLDQVARVDETAMP 371
>05_05_0290 - 23879064-23880035
Length = 323
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -2
Query: 647 ELEGELR-HSRTGLLRDQLDGLHDPV-DDLVLDTGIL 543
E EG +R H R LR LD +HD + DD D+ IL
Sbjct: 81 EFEGFIRRHRRASTLRRVLDSIHDDLADDQERDSSIL 117
>05_03_0557 - 15441039-15442730
Length = 563
Score = 28.7 bits (61), Expect = 6.7
Identities = 25/100 (25%), Positives = 44/100 (44%)
Frame = -3
Query: 514 TSTLSYSVLIPSKLLQGLTLAYKSNSFLRAKLSDL*PLPTGVIRGPFKPILLAFTESIAF 335
+ TL Y + + L+GL + S LR+KL+ P P + + LAF
Sbjct: 155 SGTLPYRTALAAVFLEGLIFLFISLVGLRSKLAKFIPKPVRISSSAGIGLFLAFI----- 209
Query: 334 WGIPNLPSGPLTAVTSTSSHSIGTLAASKIF*TATVISGP 215
G+ + L +S++ ++G AS+ A V++ P
Sbjct: 210 -GLQSSEGVGLVGFSSSTLVTLGACPASQRASVAPVVTFP 248
>04_04_1191 + 31599067-31600194
Length = 375
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 364 LLAFTESIAFWGIPNLPSGPLTAVTSTS 281
LL E + FWG+PNL S P + TS
Sbjct: 290 LLTSLERLNFWGLPNLLSLPANLASLTS 317
>10_08_0949 -
21759821-21759833,21759985-21760301,21760650-21760728,
21760816-21760912,21761305-21761410
Length = 203
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 341 RFLGDTEFAIWTPNSCYIHFLPFDRYF 261
RFL + EF N YIH+L +RYF
Sbjct: 17 RFLLELEFIQCLANPTYIHYLAQNRYF 43
>07_01_0461 +
3492302-3492413,3492868-3492964,3493053-3493131,
3493484-3493794,3494219-3494231
Length = 203
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 341 RFLGDTEFAIWTPNSCYIHFLPFDRYF 261
RFL + EF N YIH+L +RYF
Sbjct: 19 RFLLELEFIQCLANPTYIHYLAQNRYF 45
>06_01_0894 +
6853797-6853971,6855078-6855295,6856353-6856385,
6856776-6856856,6856857-6857069,6857184-6857381,
6857456-6857593,6858528-6858644,6858970-6859104
Length = 435
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 48 PPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRA 155
PPPPPFTA R + + A RI R +PA A
Sbjct: 8 PPPPPFTAG-RLPTTSRRPCFSAGRIFRCSLPAAAA 42
>05_05_0174 -
22960732-22960815,22960907-22961419,22961576-22962058,
22964191-22964673
Length = 520
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 354 NANKIGLKGPLMTPVGKGYRSLNLALRKEFDLYANVRPCKSLEGIKTL 497
+A +GL + P+G+G+ +L+ ++ F L + P SL G+ +L
Sbjct: 337 SALNVGLGVGAILPLGRGFMNLSSSVPDRFYLGGHSSPVCSLSGLSSL 384
>05_04_0337 -
20372378-20373094,20373320-20373379,20373992-20374266,
20374358-20374619
Length = 437
Score = 28.3 bits (60), Expect = 8.8
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 48 PPPPPFTASYRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVRKV-TLIPGHGIG 218
PP PP A+Y S++ A E AA + + A A ST + ++ TL+ GH G
Sbjct: 315 PPRPPCAAAYTSAA--AAPTESAAVLAAASTYSLLAAAGSSSTHIDELSTLLAGHSHG 370
>03_06_0715 + 35693002-35694585
Length = 527
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 42 ILPPPPPFTASYRSSSQFAKILEMAA 119
+ PPPPP T+S SSS +K+L A
Sbjct: 495 VKPPPPPSTSSSGSSSFASKLLSCFA 520
>02_02_0017 -
6131265-6131284,6131654-6131774,6132011-6132146,
6132423-6132529,6133006-6133099,6133199-6133395,
6134401-6134472,6135128-6135304,6135393-6135467,
6135557-6135697,6136439-6136627,6136969-6137034,
6137118-6137268,6137596-6137664,6138751-6138899,
6138969-6139100,6139198-6139523,6139599-6139635,
6139765-6139803,6140196-6140250,6140363-6140424,
6140512-6140532,6140820-6140822
Length = 812
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -2
Query: 707 HTHNISFVYSRDLLPLVFSGELEGELR--HSRTGLLRDQLD 591
H HN+S V LP+ +G +G +R HS T L + L+
Sbjct: 241 HAHNVSAVCFHPELPITLTGSEDGTVRLWHSTTYRLENTLN 281
>01_01_0274 - 2263304-2264211,2264490-2264673
Length = 363
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2
Query: 617 TGLLRDQLDGLHDPVDDLVLDTGILTLGV 531
TGLL ++GL D VDDLV L +GV
Sbjct: 214 TGLLCAGMEGLDDGVDDLVAGIDDLEVGV 242
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,034,850
Number of Sequences: 37544
Number of extensions: 514691
Number of successful extensions: 2105
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2098
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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