Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P08
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1322 - 35698314-35698322,35698537-35698619,35699685-35699823     60   2e-09
04_03_0270 - 13675169-13675334,13676902-13676984,13677057-13677302     34   0.17 
05_07_0099 - 27675917-27676032,27676137-27676260                       30   2.8  

>02_05_1322 - 35698314-35698322,35698537-35698619,35699685-35699823
          Length = 76

 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 26/54 (48%), Positives = 41/54 (75%)
 Frame = +3

Query: 237 IQQDWANREYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLE 398
           +Q DW NRE+I  I+ +++++ DFL  F+ + +S+LA+LNEKL  LERK++ LE
Sbjct: 19  VQADWENREFISNISLNVRRLFDFLLRFEATTKSKLASLNEKLDILERKLEVLE 72


>04_03_0270 - 13675169-13675334,13676902-13676984,13677057-13677302
          Length = 164

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 288 IKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLEA 401
           I    +FLNSF   C  +L+ L+ K+  L+  ++ LEA
Sbjct: 87  IANTVEFLNSFAAQCNDKLSLLHRKIVKLDSSLNLLEA 124


>05_07_0099 - 27675917-27676032,27676137-27676260
          Length = 79

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 297 ITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLEACVTK 413
           I+   +  D + R RL  +NE+L  LE +++ LEA V K
Sbjct: 34  ISQQASQLDEAARKRLQRMNERLKLLEMQMETLEAGVAK 72


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,348,911
Number of Sequences: 37544
Number of extensions: 319530
Number of successful extensions: 636
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)