Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P08
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-55|CAN99710.1|   74|Caenorhabditis elegans Hypothetical p...    92   6e-19
Z71265-2|CAA95834.2|  128|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z48795-5|CAA88729.1|  337|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical...    28   7.8  

>Z99281-55|CAN99710.1|   74|Caenorhabditis elegans Hypothetical
           protein Y57G11C.12a protein.
          Length = 74

 Score = 91.9 bits (218), Expect = 6e-19
 Identities = 38/70 (54%), Positives = 59/70 (84%)
 Frame = +3

Query: 219 ETIQKQIQQDWANREYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLE 398
           E +Q+Q++ DW NRE+ ++I  +IK I +FL+SF++SCR++LATL++KL  LERK+++LE
Sbjct: 5   EAVQQQLKDDWDNREFEQIIADNIKNIANFLSSFELSCRTKLATLSDKLNLLERKVEFLE 64

Query: 399 ACVTKGETLT 428
           A VTKG+TL+
Sbjct: 65  ARVTKGDTLS 74


>Z71265-2|CAA95834.2|  128|Caenorhabditis elegans Hypothetical
           protein M05B5.2 protein.
          Length = 128

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 304 SVIFFMLPVITSMYSLLAQSCWICFC 227
           +V+  +L  I  +  L+A SCW C+C
Sbjct: 90  AVVAIILAAIVLLLVLIAMSCWCCWC 115


>Z48795-5|CAA88729.1|  337|Caenorhabditis elegans Hypothetical
           protein R05H5.6 protein.
          Length = 337

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/47 (25%), Positives = 30/47 (63%)
 Frame = -1

Query: 304 SVIFFMLPVITSMYSLLAQSCWICFCIVSLGGVDIIYNQSRLILNSL 164
           S+ +FM+P  TS Y +     W+C+ ++++  V++++N   + +N++
Sbjct: 167 SISYFMVPD-TSGYKMN----WLCYSLLAINSVNLVFNYFLVKINTI 208


>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
           protein Y67A10A.3 protein.
          Length = 1237

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = +1

Query: 442 DKFHIIISVRHKFNNVA-ITEQSLLSSITKLQ*NLDIKSTYY 564
           D+F  + S+  +FNN+A +T+ SLL  I  L  +L++K+T +
Sbjct: 121 DQFETLSSIIQRFNNLANVTDNSLL-LIEMLPKDLNLKATTF 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,602,042
Number of Sequences: 27780
Number of extensions: 342528
Number of successful extensions: 778
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)