Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_P07
(891 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 179 8e-44
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 167 3e-40
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 158 2e-37
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 153 8e-36
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 147 3e-34
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 147 4e-34
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 139 8e-32
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 133 5e-30
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 131 2e-29
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 125 1e-27
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 122 1e-26
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 122 2e-26
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 120 7e-26
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 120 7e-26
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 116 1e-24
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 111 3e-23
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 108 2e-22
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 108 2e-22
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 107 5e-22
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 106 9e-22
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 105 1e-21
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 103 6e-21
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 100 4e-20
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 100 1e-19
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 96 9e-19
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 95 2e-18
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 88 3e-16
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 85 2e-15
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 85 3e-15
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 74 6e-12
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 67 5e-10
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 53 9e-06
UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein ... 45 0.002
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 35 3.2
UniRef50_Q4DT75 Cluster: Putative uncharacterized protein; n=2; ... 35 3.2
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 179 bits (436), Expect = 8e-44
Identities = 83/130 (63%), Positives = 103/130 (79%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
TVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 557
Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLT 124
Query: 558 TQGRRDLDRI 587
QG+RDLDRI
Sbjct: 125 PQGQRDLDRI 134
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 167 bits (406), Expect = 3e-40
Identities = 72/130 (55%), Positives = 100/130 (76%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
TVKDV + VK +AHLK++GK+++PE +D+VKTARFKEL PYDPDW+Y R A+I R I
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 557
Y+R +GV KI+GGR+RNG P HFC+SSG+I+R LQ L+ + +++ GGR++T
Sbjct: 68 YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLIT 127
Query: 558 TQGRRDLDRI 587
+QGRRDLD++
Sbjct: 128 SQGRRDLDQV 137
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 158 bits (383), Expect = 2e-37
Identities = 75/132 (56%), Positives = 97/132 (73%)
Frame = +3
Query: 192 PXTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 371
P +VKDV+ VK +A LKKTGKV++P+ D+VK + +LAPY+PDWFYVRCAAILR
Sbjct: 3 PVSVKDVDGHVFVKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNPDWFYVRCAAILR 62
Query: 372 HIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRI 551
H+YIR P G+ + K F +KRNGV PSH + GS+ RKA+Q +EAL L +K + GGR
Sbjct: 63 HLYIR-PTGLTGLCKAFSRKKRNGVKPSHRSLAHGSVIRKAIQQMEALGLCQKREGGGRS 121
Query: 552 LTTQGRRDLDRI 587
LT+ GRRDLDR+
Sbjct: 122 LTSAGRRDLDRL 133
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 153 bits (370), Expect = 8e-36
Identities = 69/130 (53%), Positives = 93/130 (71%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
+VKDV+ K + AA LK++GK+ P+ +D+VKT KELAPYDPDW+YVR AAI RHI
Sbjct: 5 SVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHI 64
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 557
Y+R VGV + K++GG G+ PSH SGS+ RK +QSLE + ++EK +GGR ++
Sbjct: 65 YLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRIS 124
Query: 558 TQGRRDLDRI 587
QG+RDLDRI
Sbjct: 125 QQGQRDLDRI 134
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 147 bits (357), Expect = 3e-34
Identities = 72/150 (48%), Positives = 100/150 (66%), Gaps = 20/150 (13%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKV--------------------KVPEHMDLVKTARFKE 317
TVKDV + VK +AHLK++GK+ ++PE +D+VKTARFKE
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKE 67
Query: 318 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 497
L PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG P HFC+SSG+I+R L
Sbjct: 68 LPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNIL 127
Query: 498 QSLEALKLVEKVQDGGRILTTQGRRDLDRI 587
Q L+ + +++ GGR++T+QGRRDLD++
Sbjct: 128 QQLQKMGIIDVDPKGGRLITSQGRRDLDQV 157
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 147 bits (356), Expect = 4e-34
Identities = 69/117 (58%), Positives = 89/117 (76%), Gaps = 1/117 (0%)
Frame = +3
Query: 210 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 389
++Q +IV+ +A LKK+GKVKVPE DLVK KELAP D DW+YVR A++ R +YIRS
Sbjct: 10 IDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRS 69
Query: 390 PVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILT 557
P GV + +++G KR GVTP+HF ++SGS+ RKALQ+LEA+K VEK DG GRILT
Sbjct: 70 PTGVGALRRVYGSNKRRGVTPNHFAKASGSVIRKALQTLEAIKWVEKHPDGNGRILT 126
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 139 bits (337), Expect = 8e-32
Identities = 64/134 (47%), Positives = 93/134 (69%), Gaps = 4/134 (2%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
TV+DV+ + +K A HLK++GK+++P D+VKTA FKE +P DPDW+Y+R A+I R +
Sbjct: 14 TVRDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYYIRAASIARKV 73
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK----VQDGG 545
Y+R GV ++ K++GG R GV HF ++SG + R LQ LE +K+VEK V GG
Sbjct: 74 YLRQYTGVGSLKKVYGGAARKGVHRQHFQKASGGLIRHILQQLEEMKVVEKCPEGVNKGG 133
Query: 546 RILTTQGRRDLDRI 587
R +T+ G++DLDRI
Sbjct: 134 RKITSHGQQDLDRI 147
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 133 bits (322), Expect = 5e-30
Identities = 60/128 (46%), Positives = 86/128 (67%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
TVKDV + V T A+HLK+ G +++P +D +KTA +ELAPYDPDW Y+R A+I R +
Sbjct: 12 TVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKL 71
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 557
YIR +G KI+G RKR G+ P +SSG + R +LQ LE L + EK + GGR +T
Sbjct: 72 YIRGGIGTGEFRKIYGDRKRRGMKPCRSSKSSGGLIRYSLQQLEKLGVAEKDERGGRRIT 131
Query: 558 TQGRRDLD 581
++G+ ++D
Sbjct: 132 SKGQSEMD 139
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 131 bits (317), Expect = 2e-29
Identities = 62/131 (47%), Positives = 85/131 (64%), Gaps = 1/131 (0%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
T+KDV + + T A LKKTG+V++P+ D+ KTA ++EL P +PDW Y R A + R +
Sbjct: 7 TLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLARKV 66
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDGGRIL 554
YIR GV T ++FGG +RNGV P+HF +G R L+ L+ LK++E GGR +
Sbjct: 67 YIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGRTI 126
Query: 555 TTQGRRDLDRI 587
T GRRDLDRI
Sbjct: 127 TATGRRDLDRI 137
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 125 bits (302), Expect = 1e-27
Identities = 62/130 (47%), Positives = 81/130 (62%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
TV DV D +V+ VA LK+ ++K PE VKT R KE P DW+Y R A+ILR +
Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRV 62
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 557
YI PVG++ + +GGRK G P F ++ GSI RKALQ LEA +EKV GR++T
Sbjct: 63 YIDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVT 122
Query: 558 TQGRRDLDRI 587
+GR LD+I
Sbjct: 123 PKGRSFLDKI 132
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 122 bits (294), Expect = 1e-26
Identities = 60/129 (46%), Positives = 83/129 (64%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
TV DV D ++ VA LK KVK PE ++ VKT KE P +PDW+YVR AA+LR +
Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRV 62
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 557
YI PVGV ++ +GG+K G P F R SG+I R+ALQ LE L+++ ++ GR++T
Sbjct: 63 YIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKR-EENGRVIT 121
Query: 558 TQGRRDLDR 584
+GR LD+
Sbjct: 122 PEGRSFLDK 130
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 122 bits (293), Expect = 2e-26
Identities = 57/129 (44%), Positives = 82/129 (63%)
Frame = +3
Query: 201 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 380
+KDV +K A HLKK+GK+++PE +D VKT KELAP +PDW Y+R AAI R +Y
Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVY 66
Query: 381 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTT 560
+ + +GV + + +G + PSH SG + R LQ LE + +V K+Q GR LT
Sbjct: 67 LNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVGKIQ-SGRSLTK 125
Query: 561 QGRRDLDRI 587
+GR+D+D+I
Sbjct: 126 EGRKDMDKI 134
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 120 bits (288), Expect = 7e-26
Identities = 54/124 (43%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
++KD D VK A H+K G ++ P+ +D KT+ KELAP DPDWFY+R AA+LRH+
Sbjct: 27 SLKDCNPDLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKELAPQDPDWFYIRAAAVLRHL 86
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-VQDGGRIL 554
Y GV + K++ +KRNG P+H CR+SG I R +Q LE++ +E+ ++ GR L
Sbjct: 87 YFHPDSGVDRLRKVYSSKKRNGSAPNHTCRASGKILRTIVQQLESIGFLEQDLKKHGRRL 146
Query: 555 TTQG 566
+ +G
Sbjct: 147 SRKG 150
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 120 bits (288), Expect = 7e-26
Identities = 60/133 (45%), Positives = 85/133 (63%), Gaps = 4/133 (3%)
Frame = +3
Query: 201 VKDVE---QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 371
++DVE K + +A LK+ GK+ +P +D VKT+ EL P D DW+YVR AA+ R
Sbjct: 77 IEDVEILTAQKFIAAYSAFLKRQGKLPIPGWVDTVKTSCSNELPPQDSDWYYVRAAAVAR 136
Query: 372 HIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGR 548
HIY+R VGV + K+ G K G P+H +SGS+ RK +QSLE + ++E ++ GGR
Sbjct: 137 HIYMRKTVGVGRLRKVHGSTKNRGSRPNHHVDASGSVDRKIIQSLEKIGVLEYDEEKGGR 196
Query: 549 ILTTQGRRDLDRI 587
+T G+RDLDRI
Sbjct: 197 RITQAGQRDLDRI 209
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 116 bits (278), Expect = 1e-24
Identities = 62/139 (44%), Positives = 86/139 (61%), Gaps = 1/139 (0%)
Frame = +3
Query: 174 TSARCVPXTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVR 353
T+A V T KDV +++ A LKK GK+ +PE +D VKTA KEL P + DW Y+R
Sbjct: 10 TAAPRVIKTAKDVPAGILIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPPQNSDWLYIR 69
Query: 354 CAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE-K 530
A+ILRH+Y+R VGV ++K +G ++RNG +H +S I R L L++L LVE
Sbjct: 70 AASILRHLYVRPNVGVGALSKFYGRKQRNGTARNHSAVASRGIIRYCLIQLQSLGLVEFN 129
Query: 531 VQDGGRILTTQGRRDLDRI 587
G R L+ QG+R+LD I
Sbjct: 130 PNTGTRRLSPQGQRELDSI 148
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 111 bits (266), Expect = 3e-23
Identities = 55/124 (44%), Positives = 77/124 (62%)
Frame = +3
Query: 210 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 389
V ++V+ +A LK ++K PE VKT R KE P DPDW+Y+R A+ILR +Y+
Sbjct: 7 VPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDG 66
Query: 390 PVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGR 569
PVGV + +GGR+ G P F + SG+I RK LQ LE LVEK ++ GR++T +GR
Sbjct: 67 PVGVSRLRTYYGGRQDRGARPERFRKGSGAIIRKILQQLEEAGLVEKTEE-GRVVTPEGR 125
Query: 570 RDLD 581
+D
Sbjct: 126 SLVD 129
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 108 bits (259), Expect = 2e-22
Identities = 62/124 (50%), Positives = 76/124 (61%)
Frame = +3
Query: 216 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 395
Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPY+ +WFY R A+ RH
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYEENWFYTRAASTARH------- 208
Query: 396 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 575
V PSHF R S S A + LQ+LE LK+VEK QDGGR L QG+RD
Sbjct: 209 ---------------RVRPSHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRD 253
Query: 576 LDRI 587
LDRI
Sbjct: 254 LDRI 257
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 108 bits (259), Expect = 2e-22
Identities = 57/130 (43%), Positives = 77/130 (59%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
TV DV D ++K VA LK V PE VKT KE +P DW+Y+R A+I R +
Sbjct: 3 TVYDVPADLLIKRVAERLKDM--VAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRV 60
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 557
YI PVG++ + +GGRKR G P F + SG+I R AL LE L V+K ++ GR++T
Sbjct: 61 YIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQLEQLGFVKKTRE-GRVVT 119
Query: 558 TQGRRDLDRI 587
GR LD++
Sbjct: 120 PMGRSFLDKV 129
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 107 bits (256), Expect = 5e-22
Identities = 55/131 (41%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
TV DV D +++ VA LKK ++K P KT KE+ P DPDW++ R AA+LR +
Sbjct: 3 TVYDVPADHLIRKVAEELKKRQEIKPPAWAAFAKTGVHKEMPPEDPDWWFTRAAAVLRRV 62
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGRIL 554
Y+ P+GV+ + +GG K G P+ F + SGS+ RKALQ LEA L+ V D GR +
Sbjct: 63 YVDGPLGVERMRSFYGGSKNRGSKPNAFRKGSGSVLRKALQQLEAAGLI--VHDKTGRKV 120
Query: 555 TTQGRRDLDRI 587
+ G LD +
Sbjct: 121 SPAGMAFLDSV 131
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 106 bits (254), Expect = 9e-22
Identities = 53/130 (40%), Positives = 77/130 (59%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
T+KDV + +KT A H K+ GK+ VP +++K++ +E AP +PDW+Y+RCAA+LR I
Sbjct: 30 TLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPDWYYIRCAAVLRAI 89
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 557
Y+R VG ++K FG +K G P H SS A +SL L LVE G+ LT
Sbjct: 90 YLRPGVGYGGLSKRFGNKKNYGSRPEHTVTSSTGPLHWACKSLTKLGLVEPGAQSGQRLT 149
Query: 558 TQGRRDLDRI 587
+G + D +
Sbjct: 150 RKGHKFADSL 159
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 105 bits (253), Expect = 1e-21
Identities = 57/135 (42%), Positives = 80/135 (59%), Gaps = 5/135 (3%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
TVKDV ++ A +LKK K+K+PE +VKT KE +P D DW YVR AA+ R I
Sbjct: 57 TVKDVPAQDFIRGYAEYLKKNNKIKIPEWASIVKTGLGKETSPIDQDWMYVRAAALARKI 116
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-----VQDG 542
Y+R GV +T +FG NG S SG + R LQ LE +K+++K ++ G
Sbjct: 117 YVRGHWGVGNLTHMFGSVNDNGKHES----GSGKVIRYLLQQLETIKVLKKDNKSLLKKG 172
Query: 543 GRILTTQGRRDLDRI 587
RI+T +G++DL+RI
Sbjct: 173 SRIVTKEGQQDLNRI 187
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 103 bits (247), Expect = 6e-21
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 1/124 (0%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
++ D + D + A ++ + P+ +D VKT+ KELAP DP WFY+R AAILRH+
Sbjct: 27 SLNDCQPDVFIAAFAQQMELKNYIDPPKWIDYVKTSCAKELAPQDPKWFYIRSAAILRHL 86
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRIL 554
Y G+ + +++ RKR G P+H C +SG I R +Q LEA +EK +D GR L
Sbjct: 87 YFHPDEGIGRLRRVYASRKRRGCAPNHTCPASGKIIRTIVQQLEANGFLEKSKDNKGRRL 146
Query: 555 TTQG 566
+ +G
Sbjct: 147 SRRG 150
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 100 bits (240), Expect = 4e-20
Identities = 55/127 (43%), Positives = 73/127 (57%), Gaps = 2/127 (1%)
Frame = +3
Query: 207 DVEQDKIVKTVAAHLK-KTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 383
+V D +++ VA LK K +VK P KT KE P D DW+YVR A+ILR +Y
Sbjct: 6 EVPADLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILRKLYK 65
Query: 384 R-SPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTT 560
P+G++T I+GGR+ G P HF ++ GS+ RK LQ LE LV KV GR ++
Sbjct: 66 SPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISP 125
Query: 561 QGRRDLD 581
GR LD
Sbjct: 126 AGRSLLD 132
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 99.5 bits (237), Expect = 1e-19
Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
TVKDV ++ A+HLKK K+ +PE T+ +ELAP D DW Y+R AA+ R +
Sbjct: 9 TVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKV 68
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG----- 542
Y++ G+ T+ IFG K G + G I R AL+SLE LK++ K ++
Sbjct: 69 YLKPHTGISTLKHIFGSNKDRGNLRNKHQACHGKILRWALKSLEDLKIIRKDKNSATKKF 128
Query: 543 GRILTTQGRRDLDRI 587
R++T +G +L+RI
Sbjct: 129 SRVITKEGMTELNRI 143
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 96.3 bits (229), Expect = 9e-19
Identities = 46/128 (35%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
Frame = +3
Query: 201 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 380
+KDV+ + + A +LK K+ P+ + VKT + ++LAP D DW++++ ++ILR +Y
Sbjct: 50 IKDVDAELFISAYAKYLKLHNKITFPKWCNFVKTGKGRKLAPLDEDWYFIKTSSILRRLY 109
Query: 381 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-VQDGGRILT 557
I +GV + + F ++R GV P+H +SG I R LQ LE + VE+ + GR LT
Sbjct: 110 IHPDIGVGFLRRQFSYKQRRGVAPNHTSLASGKILRSILQQLENIGYVEQNPKKKGRRLT 169
Query: 558 TQGRRDLD 581
T+G ++
Sbjct: 170 TKGENAIN 177
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 95.5 bits (227), Expect = 2e-18
Identities = 47/129 (36%), Positives = 74/129 (57%)
Frame = +3
Query: 201 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 380
V DV D ++ +A LK + P + VKT + P + DW++ RCA+I+R IY
Sbjct: 4 VYDVPADVLIGKLAEILKNED-IPAPSWIPFVKTGAHADKPPQNRDWWHTRCASIMRKIY 62
Query: 381 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTT 560
+ P+G+ + K +GG K +G +H + G+I R A+ LE L +EKV+ GRI++
Sbjct: 63 LHGPIGINELRKDYGGGKPSGYGAAHHKDAGGAIIRNAIHGLEKLGYLEKVEKKGRIVSK 122
Query: 561 QGRRDLDRI 587
QG + LDR+
Sbjct: 123 QGMQKLDRL 131
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 87.8 bits (208), Expect = 3e-16
Identities = 45/128 (35%), Positives = 72/128 (56%)
Frame = +3
Query: 204 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 383
+++ D +V +A H + T ++ PE DLVKTA K+LAP + +W+Y+R AA+ R IY+
Sbjct: 14 REIAADVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAPANNNWWYIRAAAVTRQIYL 73
Query: 384 RSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQ 563
+ + +G + P H +S + R LQ LE LV +V + GR LT +
Sbjct: 74 HHDASLSGLAFHYGANMKAVTMPKHHHEASRKVIRTILQQLEKAGLV-RVAEKGRQLTPK 132
Query: 564 GRRDLDRI 587
G++ LD+I
Sbjct: 133 GQKLLDQI 140
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 85.4 bits (202), Expect = 2e-15
Identities = 48/128 (37%), Positives = 67/128 (52%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
+VK V D ++ V+ LK+ K+K P + VKT KE P DW YVR A++LR +
Sbjct: 3 SVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKL 62
Query: 378 YIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILT 557
YI +G+ ++ +GG+ G H S SI R LE+ LV+K Q GR L+
Sbjct: 63 YINGYLGISRMSSEYGGKVDRGSKRYHAASGSRSITRFLFHELESAGLVQKTQK-GRSLS 121
Query: 558 TQGRRDLD 581
QG LD
Sbjct: 122 PQGMSLLD 129
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 84.6 bits (200), Expect = 3e-15
Identities = 41/123 (33%), Positives = 71/123 (57%)
Frame = +3
Query: 219 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 398
D ++ +A LKK ++ P+ + VKT + P D W++ RCA+++R IY+ P+G
Sbjct: 4 DVLIGRLAEILKKE-ELPRPDWVPFVKTGVHADKPPQDRAWWHTRCASLMRKIYLHGPIG 62
Query: 399 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 578
+ + +GG K G ++ ++ G+I R A+ LE L +EK+ GRI++ QG + L
Sbjct: 63 INGLRSEYGGGKPRGYGAANHRKAGGAIIRNAVHGLEKLGYIEKLDKKGRIVSRQGMQKL 122
Query: 579 DRI 587
DR+
Sbjct: 123 DRL 125
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 73.7 bits (173), Expect = 6e-12
Identities = 33/127 (25%), Positives = 73/127 (57%)
Frame = +3
Query: 201 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 380
+KD+ +D + A L+K+G++ +P +++ K++ K+ +P +W + R A+I+ Y
Sbjct: 5 LKDIPKDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSPNQSNWIFKRMASIIIKFY 64
Query: 381 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTT 560
I +G + + +I+ G+K+ S SG I R +++ LE +K+++K + G L+
Sbjct: 65 IYKKLGTRQLVRIYNGKKKG--RRSKKTNGSGKIIRFSIKELEKMKILKKDESGRFGLSK 122
Query: 561 QGRRDLD 581
+ + ++D
Sbjct: 123 KAQNEID 129
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 67.3 bits (157), Expect = 5e-10
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 377
T+ DV D +++ VAA L+ ++ P+ ++ K+ KEL P D++YVR A++LR +
Sbjct: 15 TIYDVPGDALIEEVAARLED--RIDEPDWVEFAKSGAGKELPPEQEDFWYVRSASLLRKV 72
Query: 378 YIRSPVGVKTVTKIFGGRKRN----GVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 545
P+G++ + +G +KR V P S + R +LQ+LE LV G
Sbjct: 73 AQNEPIGIERLATEYGSKKRGSNRYSVRPGEHEGGSRKLIRASLQALEEDGLVTTAAGEG 132
Query: 546 RILTTQGRRDLDRI 587
R ++ G L +
Sbjct: 133 RRISDDGEAFLSEV 146
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 53.2 bits (122), Expect = 9e-06
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Frame = +3
Query: 198 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKT-ARFKELAPYDPDWFYVRCAAIL-- 368
TVKDV Q + V+ +AA LKK+ VK+ EL P + C +++
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSPNGWTQSSWPNVKSLPHTHELLPQ-----HSNCTSVVVR 59
Query: 369 -RHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALK 518
+ + + P T + GR+RNGV PSHF R S ++AR+ LQ+LE LK
Sbjct: 60 GKGVGMLVPRPRSTEDR---GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 1 - Pan troglodytes
Length = 180
Score = 45.2 bits (102), Expect = 0.002
Identities = 32/128 (25%), Positives = 60/128 (46%)
Frame = -2
Query: 584 SVKVSSTLCGENATTVLNFLNKLQCLQRLQSLACNTA**PAEM*RCNSITFAPTKDLGDS 405
SV++S +L + A +L + Q LQ L+ A +T AE+ ++++ DLG
Sbjct: 25 SVQISLSLRCQFAAAILVLFHHFQPLQGLEDPAGHTLGASAEVAGHDAVSLTSPIDLGHG 84
Query: 404 LYSNR*ANVNMTKDGSTTHIEPIRVIRSQLFEASCLYKIHVLRYLDFARFF*VSSDSFNN 225
+ V + + GS++ +EP+ ++ S+LF L +H F S +
Sbjct: 85 ANPSATPEVQVPRCGSSSRVEPVLIVGSKLFVLGQLDGVHPFGDFQLPGLFEEGCQSSDE 144
Query: 224 LVLFNILY 201
L+L ++ Y
Sbjct: 145 LLLVHVFY 152
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 34.7 bits (76), Expect = 3.2
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 415 RSLVGA-NVMELHLHISAGHQAVLHARLCNRWRH 513
R+L GA +E H +AG + +HAR+ RWRH
Sbjct: 190 RALAGAAGAVEQHRRQAAGQRIFMHARIAQRWRH 223
>UniRef50_Q4DT75 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 1488
Score = 34.7 bits (76), Expect = 3.2
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 359 STTHIEPIRVIRSQLFEASCLYKIHVLRYLDFARFF*VSSDSFNNLVLFNILYCXRN-AS 183
S TH+E + R+++ S L + +LR LD + ++ D+F VL LY RN S
Sbjct: 891 SCTHLESLEASRNRISSLSELQHLSLLRTLDLSENCLITWDAFAQHVLLQNLYLSRNQIS 950
Query: 182 CRRKLLF 162
K LF
Sbjct: 951 AFPKTLF 957
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,380,293
Number of Sequences: 1657284
Number of extensions: 12283577
Number of successful extensions: 29074
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 28102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29055
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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