Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P07
         (891 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    24   1.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   5.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   9.8  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -3

Query: 496 KALRAILPDDLQKCEGVTPLRLRPPKILVTVF 401
           ++L +I+ +   K  G T +R+RPPK+  T +
Sbjct: 63  ESLASIIDEAATKVHGTT-VRVRPPKVYPTPY 93


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -3

Query: 496 KALRAILPDDLQKCEGVTPLRLRPPKILVTVF 401
           ++L +I+ +   K  G T +R+RPPK+  T +
Sbjct: 377 ESLASIIDEAATKVHGTT-VRVRPPKVYPTPY 407


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -3

Query: 496 KALRAILPDDLQKCEGVTPLRLRPPKILVTVF 401
           ++L +I+ +   K  G T +R+RPPK+  T +
Sbjct: 610 ESLASIIDEAATKVHGTT-VRVRPPKVYPTPY 640


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -3

Query: 496 KALRAILPDDLQKCEGVTPLRLRPPKILVTVF 401
           ++L +I+ +   K  G T +R+RPPK+  T +
Sbjct: 610 ESLASIIDEAATKVHGTT-VRVRPPKVYPTPY 640


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = -1

Query: 465 CRNVKV*LHYVCAHQRSW*QSLLQQVSECKYDEGWQHNAHRTNQ 334
           C N++      C+    W    L +  +C Y EGW   +   +Q
Sbjct: 200 CDNLQYSFDNQCSGTIDW---ALPKQEDCFYQEGWNGQSFDVSQ 240


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory
          receptor candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 48 FGFLPVANTRQG 83
          FGFLPV ++++G
Sbjct: 25 FGFLPVCSSQKG 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,749
Number of Sequences: 336
Number of extensions: 3466
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)