Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P04
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0568 + 18837195-18837203,18837694-18837741,18837853-188379...    29   3.7  
01_03_0298 + 14771001-14771360                                         29   6.5  
03_05_0941 + 29008322-29009686,29009929-29010012,29010889-290110...    28   8.5  

>10_08_0568 +
           18837195-18837203,18837694-18837741,18837853-18837912,
           18837986-18838155,18838297-18838369,18838529-18838594,
           18838685-18838768,18838950-18839027,18839122-18839205,
           18839562-18839641,18839791-18839848,18839933-18840235,
           18840361-18840531,18840972-18841204,18841303-18841705,
           18841961-18842212,18842293-18842790,18843073-18843170,
           18843314-18843413,18843653-18843798,18843912-18844068
          Length = 1056

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = +1

Query: 148 IPGCGPALFCWSALLVW*LMTCLGLEETSLXVQRESCSKIW-AFLSIVNRLGRRHCPPLL 324
           IP CG     ++ +        + L+   +   R+ C+K+W A    +N+LG ++ PP  
Sbjct: 706 IPECGTDALRFALISYTSQSDKINLDIKRVHGYRQWCNKLWNAVRFAMNKLGDQYTPPAA 765

Query: 325 AVTYGLKPMHRFTTHKLLKYV 387
                + P+ ++    L K V
Sbjct: 766 IALCSMPPLCKWILSALNKAV 786


>01_03_0298 + 14771001-14771360
          Length = 119

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +3

Query: 486 PVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYSSDYYQITSDYLVTKVF 632
           P + + + E A GLV  V ++A   W G ++    Y  +    ++ ++F
Sbjct: 60  PAMERLVAEVARGLVGGVDAHARDRWGGRREEHMRYGALIGGPIILEIF 108


>03_05_0941 +
           29008322-29009686,29009929-29010012,29010889-29011052,
           29011208-29011233,29011494-29011583,29012135-29012229,
           29012328-29012495
          Length = 663

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
 Frame = +3

Query: 435 KAGILY-----GNVQDYVVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYSSDYYQ 599
           K GILY     G +  + +    V +KTI E  PG   +        W  L +    Y  
Sbjct: 281 KDGILYAVNKVGEIHAFDLSGPVVTMKTIIEMVPGYACDKMYIVQAPWGDLLQVWRSYEY 340

Query: 600 ITSDY 614
           I  DY
Sbjct: 341 IEGDY 345


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,876,528
Number of Sequences: 37544
Number of extensions: 436914
Number of successful extensions: 978
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)