Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P04
         (875 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068479-1|AAH68479.1|  689|Homo sapiens hypothetical protein FL...    57   1e-07
AK074981-1|BAC11331.1|  486|Homo sapiens protein ( Homo sapiens ...    57   1e-07
AK000261-1|BAA91038.1|  431|Homo sapiens protein ( Homo sapiens ...    57   1e-07
AC013472-3|AAY14654.1|  431|Homo sapiens unknown protein.              57   1e-07
AM261745-1|CAK12620.1|  362|Homo sapiens MHC class I antigen pro...    31   7.2  
EF375691-1|ABN51223.1|  181|Homo sapiens MHC class I antigen pro...    30   9.6  

>BC068479-1|AAH68479.1|  689|Homo sapiens hypothetical protein
           FLJ20254 protein.
          Length = 689

 Score = 56.8 bits (131), Expect = 1e-07
 Identities = 30/86 (34%), Positives = 45/86 (52%)
 Frame = +3

Query: 150 PWLWASFVLLVSIAGLVAYDVSRAGGNFPKXTTGKLFKDLGILEHSQQAWQKTLSTSARG 329
           PW     +LLV   G + +D+ R+  +F    TG+L +  G L  SQQA  K  S S +G
Sbjct: 481 PWTRLLLLLLVFAVGFLCHDL-RSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSLQG 539

Query: 330 YLWLETNAPVYYAQTVEICRPYTQLS 407
           Y WL    P++ +  + + RP  QL+
Sbjct: 540 YSWLGETLPLWGSHLLTVVRPSLQLA 565


>AK074981-1|BAC11331.1|  486|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90500 fis, clone NT2RP3004025. ).
          Length = 486

 Score = 56.8 bits (131), Expect = 1e-07
 Identities = 30/86 (34%), Positives = 45/86 (52%)
 Frame = +3

Query: 150 PWLWASFVLLVSIAGLVAYDVSRAGGNFPKXTTGKLFKDLGILEHSQQAWQKTLSTSARG 329
           PW     +LLV   G + +D+ R+  +F    TG+L +  G L  SQQA  K  S S +G
Sbjct: 278 PWTRLLLLLLVFAVGFLCHDL-RSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSLQG 336

Query: 330 YLWLETNAPVYYAQTVEICRPYTQLS 407
           Y WL    P++ +  + + RP  QL+
Sbjct: 337 YSWLGETLPLWGSHLLTVVRPSLQLA 362


>AK000261-1|BAA91038.1|  431|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20254 fis, clone COLF6926. ).
          Length = 431

 Score = 56.8 bits (131), Expect = 1e-07
 Identities = 30/86 (34%), Positives = 45/86 (52%)
 Frame = +3

Query: 150 PWLWASFVLLVSIAGLVAYDVSRAGGNFPKXTTGKLFKDLGILEHSQQAWQKTLSTSARG 329
           PW     +LLV   G + +D+ R+  +F    TG+L +  G L  SQQA  K  S S +G
Sbjct: 223 PWTRLLLLLLVFAVGFLCHDL-RSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSLQG 281

Query: 330 YLWLETNAPVYYAQTVEICRPYTQLS 407
           Y WL    P++ +  + + RP  QL+
Sbjct: 282 YSWLGETLPLWGSHLLTVVRPSLQLA 307


>AC013472-3|AAY14654.1|  431|Homo sapiens unknown protein.
          Length = 431

 Score = 56.8 bits (131), Expect = 1e-07
 Identities = 30/86 (34%), Positives = 45/86 (52%)
 Frame = +3

Query: 150 PWLWASFVLLVSIAGLVAYDVSRAGGNFPKXTTGKLFKDLGILEHSQQAWQKTLSTSARG 329
           PW     +LLV   G + +D+ R+  +F    TG+L +  G L  SQQA  K  S S +G
Sbjct: 223 PWTRLLLLLLVFAVGFLCHDL-RSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSLQG 281

Query: 330 YLWLETNAPVYYAQTVEICRPYTQLS 407
           Y WL    P++ +  + + RP  QL+
Sbjct: 282 YSWLGETLPLWGSHLLTVVRPSLQLA 307


>AM261745-1|CAK12620.1|  362|Homo sapiens MHC class I antigen
           protein.
          Length = 362

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 336 WLETNAPVYYAQTVEICRPYTQLSKDAFFIALK 434
           W+E   P Y+ +  +IC+  TQ  ++   IAL+
Sbjct: 75  WIEQEGPEYWDRNTQICKTNTQTDRENLRIALR 107


>EF375691-1|ABN51223.1|  181|Homo sapiens MHC class I antigen
           protein.
          Length = 181

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 20/75 (26%), Positives = 30/75 (40%)
 Frame = +3

Query: 210 VSRAGGNFPKXTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAPVYYAQTVEICR 389
           VSR G   P+  T     D   +     A        A    W+E   P Y+ +  +IC+
Sbjct: 11  VSRPGRGEPRFITVGYVDDTQFVRFDSDAASPREEPRAP---WIEQEGPEYWDRNTQICK 67

Query: 390 PYTQLSKDAFFIALK 434
             TQ  ++   IAL+
Sbjct: 68  TNTQTYRENLRIALR 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,200,862
Number of Sequences: 237096
Number of extensions: 2540484
Number of successful extensions: 6282
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6282
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)