Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P04
         (875 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024188-1|ABC86250.1|  237|Drosophila melanogaster RH51633p pro...   102   6e-22
BT003656-1|AAO39660.1|  677|Drosophila melanogaster AT01533p pro...   102   6e-22
AE014134-1994|AAF53036.1|  237|Drosophila melanogaster CG33129-P...   102   6e-22
AE014134-1993|AAN10769.1|  237|Drosophila melanogaster CG33129-P...   102   6e-22
AE014134-1992|AAN10768.1|  237|Drosophila melanogaster CG33129-P...   102   6e-22
AE014134-1991|AAF53037.2|  677|Drosophila melanogaster CG33129-P...   102   6e-22

>BT024188-1|ABC86250.1|  237|Drosophila melanogaster RH51633p
           protein.
          Length = 237

 Score =  102 bits (245), Expect = 6e-22
 Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
 Frame = +3

Query: 153 WLWASFVLLVSIAGLVAYDVSRAG-GNFPKXTTGKLFKDLGILEHSQQAWQKTLSTSARG 329
           W   S  ++  IAG + YD    G G F K  TGK+ K+ G+L H Q++W   +   ARG
Sbjct: 50  WTLGSIFIIALIAGALYYDTEVNGKGVFEKSATGKVLKNAGVLPHVQKSWYTVMGAGARG 109

Query: 330 YLWLETNAPVYYAQTVEICRPYTQLSKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIE 509
           Y W E N P Y         P  + + D + +A   A   Y N + Y   K PVV K I+
Sbjct: 110 YKWAEVNVPPY-------AEPVIKTTCDLWKLARNAACNAYQNGKGYFGAKWPVVAKFID 162

Query: 510 EYAPGLVDNVQSYASTAWSGLKKYSSDYYQITSDYLVTKVFVGDWAPEVLQNKTQSALNM 689
           +Y P     ++++A    +G+   ++  Y+  +  +  KV VG  +PE        ALN 
Sbjct: 163 QYVPNSSGKIEAFA----AGVSDLAASSYEKAAALIKEKVLVGRLSPE----NINQALNQ 214

Query: 690 TKSQVSSYYVWFRQQVHIYSEI 755
           T++    YY  F ++V  Y+++
Sbjct: 215 TRNAALEYYNQFHKKVDAYAKL 236


>BT003656-1|AAO39660.1|  677|Drosophila melanogaster AT01533p protein.
          Length = 677

 Score =  102 bits (245), Expect = 6e-22
 Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
 Frame = +3

Query: 153  WLWASFVLLVSIAGLVAYDVSRAG-GNFPKXTTGKLFKDLGILEHSQQAWQKTLSTSARG 329
            W   S  ++  IAG + YD    G G F K  TGK+ K+ G+L H Q++W   +   ARG
Sbjct: 490  WTLGSIFIIALIAGALYYDTEVNGKGVFEKSATGKVLKNAGVLPHVQKSWYTVMGAGARG 549

Query: 330  YLWLETNAPVYYAQTVEICRPYTQLSKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIE 509
            Y W E N P Y         P  + + D + +A   A   Y N + Y   K PVV K I+
Sbjct: 550  YKWAEVNVPPY-------AEPVIKTTCDLWKLARNAACNAYQNGKGYFGAKWPVVAKFID 602

Query: 510  EYAPGLVDNVQSYASTAWSGLKKYSSDYYQITSDYLVTKVFVGDWAPEVLQNKTQSALNM 689
            +Y P     ++++A    +G+   ++  Y+  +  +  KV VG  +PE        ALN 
Sbjct: 603  QYVPNSSGKIEAFA----AGVSDLAASSYEKAAALIKEKVLVGRLSPE----NINQALNQ 654

Query: 690  TKSQVSSYYVWFRQQVHIYSEI 755
            T++    YY  F ++V  Y+++
Sbjct: 655  TRNAALEYYNQFHKKVDAYAKL 676


>AE014134-1994|AAF53036.1|  237|Drosophila melanogaster CG33129-PC,
           isoform C protein.
          Length = 237

 Score =  102 bits (245), Expect = 6e-22
 Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
 Frame = +3

Query: 153 WLWASFVLLVSIAGLVAYDVSRAG-GNFPKXTTGKLFKDLGILEHSQQAWQKTLSTSARG 329
           W   S  ++  IAG + YD    G G F K  TGK+ K+ G+L H Q++W   +   ARG
Sbjct: 50  WTLGSIFIIALIAGALYYDTEVNGKGVFEKSATGKVLKNAGVLPHVQKSWYTVMGAGARG 109

Query: 330 YLWLETNAPVYYAQTVEICRPYTQLSKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIE 509
           Y W E N P Y         P  + + D + +A   A   Y N + Y   K PVV K I+
Sbjct: 110 YKWAEVNVPPY-------AEPVIKTTCDLWKLARNAACNAYQNGKGYFGAKWPVVAKFID 162

Query: 510 EYAPGLVDNVQSYASTAWSGLKKYSSDYYQITSDYLVTKVFVGDWAPEVLQNKTQSALNM 689
           +Y P     ++++A    +G+   ++  Y+  +  +  KV VG  +PE        ALN 
Sbjct: 163 QYVPNSSGKIEAFA----AGVSDLAASSYEKAAALIKEKVLVGRLSPE----NINQALNQ 214

Query: 690 TKSQVSSYYVWFRQQVHIYSEI 755
           T++    YY  F ++V  Y+++
Sbjct: 215 TRNAALEYYNQFHKKVDAYAKL 236


>AE014134-1993|AAN10769.1|  237|Drosophila melanogaster CG33129-PB,
           isoform B protein.
          Length = 237

 Score =  102 bits (245), Expect = 6e-22
 Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
 Frame = +3

Query: 153 WLWASFVLLVSIAGLVAYDVSRAG-GNFPKXTTGKLFKDLGILEHSQQAWQKTLSTSARG 329
           W   S  ++  IAG + YD    G G F K  TGK+ K+ G+L H Q++W   +   ARG
Sbjct: 50  WTLGSIFIIALIAGALYYDTEVNGKGVFEKSATGKVLKNAGVLPHVQKSWYTVMGAGARG 109

Query: 330 YLWLETNAPVYYAQTVEICRPYTQLSKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIE 509
           Y W E N P Y         P  + + D + +A   A   Y N + Y   K PVV K I+
Sbjct: 110 YKWAEVNVPPY-------AEPVIKTTCDLWKLARNAACNAYQNGKGYFGAKWPVVAKFID 162

Query: 510 EYAPGLVDNVQSYASTAWSGLKKYSSDYYQITSDYLVTKVFVGDWAPEVLQNKTQSALNM 689
           +Y P     ++++A    +G+   ++  Y+  +  +  KV VG  +PE        ALN 
Sbjct: 163 QYVPNSSGKIEAFA----AGVSDLAASSYEKAAALIKEKVLVGRLSPE----NINQALNQ 214

Query: 690 TKSQVSSYYVWFRQQVHIYSEI 755
           T++    YY  F ++V  Y+++
Sbjct: 215 TRNAALEYYNQFHKKVDAYAKL 236


>AE014134-1992|AAN10768.1|  237|Drosophila melanogaster CG33129-PA,
           isoform A protein.
          Length = 237

 Score =  102 bits (245), Expect = 6e-22
 Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
 Frame = +3

Query: 153 WLWASFVLLVSIAGLVAYDVSRAG-GNFPKXTTGKLFKDLGILEHSQQAWQKTLSTSARG 329
           W   S  ++  IAG + YD    G G F K  TGK+ K+ G+L H Q++W   +   ARG
Sbjct: 50  WTLGSIFIIALIAGALYYDTEVNGKGVFEKSATGKVLKNAGVLPHVQKSWYTVMGAGARG 109

Query: 330 YLWLETNAPVYYAQTVEICRPYTQLSKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIE 509
           Y W E N P Y         P  + + D + +A   A   Y N + Y   K PVV K I+
Sbjct: 110 YKWAEVNVPPY-------AEPVIKTTCDLWKLARNAACNAYQNGKGYFGAKWPVVAKFID 162

Query: 510 EYAPGLVDNVQSYASTAWSGLKKYSSDYYQITSDYLVTKVFVGDWAPEVLQNKTQSALNM 689
           +Y P     ++++A    +G+   ++  Y+  +  +  KV VG  +PE        ALN 
Sbjct: 163 QYVPNSSGKIEAFA----AGVSDLAASSYEKAAALIKEKVLVGRLSPE----NINQALNQ 214

Query: 690 TKSQVSSYYVWFRQQVHIYSEI 755
           T++    YY  F ++V  Y+++
Sbjct: 215 TRNAALEYYNQFHKKVDAYAKL 236


>AE014134-1991|AAF53037.2|  677|Drosophila melanogaster CG33129-PE,
            isoform E protein.
          Length = 677

 Score =  102 bits (245), Expect = 6e-22
 Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
 Frame = +3

Query: 153  WLWASFVLLVSIAGLVAYDVSRAG-GNFPKXTTGKLFKDLGILEHSQQAWQKTLSTSARG 329
            W   S  ++  IAG + YD    G G F K  TGK+ K+ G+L H Q++W   +   ARG
Sbjct: 490  WTLGSIFIIALIAGALYYDTEVNGKGVFEKSATGKVLKNAGVLPHVQKSWYTVMGAGARG 549

Query: 330  YLWLETNAPVYYAQTVEICRPYTQLSKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIE 509
            Y W E N P Y         P  + + D + +A   A   Y N + Y   K PVV K I+
Sbjct: 550  YKWAEVNVPPY-------AEPVIKTTCDLWKLARNAACNAYQNGKGYFGAKWPVVAKFID 602

Query: 510  EYAPGLVDNVQSYASTAWSGLKKYSSDYYQITSDYLVTKVFVGDWAPEVLQNKTQSALNM 689
            +Y P     ++++A    +G+   ++  Y+  +  +  KV VG  +PE        ALN 
Sbjct: 603  QYVPNSSGKIEAFA----AGVSDLAASSYEKAAALIKEKVLVGRLSPE----NINQALNQ 654

Query: 690  TKSQVSSYYVWFRQQVHIYSEI 755
            T++    YY  F ++V  Y+++
Sbjct: 655  TRNAALEYYNQFHKKVDAYAKL 676


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,014,770
Number of Sequences: 53049
Number of extensions: 776626
Number of successful extensions: 1604
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)