Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_P03
         (882 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0269 + 15087481-15087893,15087978-15088074,15089068-150891...    29   4.9  
03_02_0168 + 6094658-6096220,6096335-6096608,6096671-6096821,609...    29   4.9  
09_06_0176 + 21351884-21352693,21352821-21352976,21353425-213536...    29   6.5  

>08_02_0269 + 15087481-15087893,15087978-15088074,15089068-15089112,
            15089281-15089492,15090809-15090911,15091002-15091097,
            15091405-15091473,15093341-15093588,15093640-15093759,
            15093847-15094284,15094503-15094620,15095262-15095303,
            15097099-15097161,15097365-15097475,15097730-15097801,
            15097875-15097993,15099682-15099745,15100238-15101860
          Length = 1350

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 174  MSSLPIVSIIRRETFSSAHRLHSPFLSDEENKKVYGKCNNPNGHGHNY 317
            M +LP+     +E  + A+R  + F  +EE    YG+  N +G G +Y
Sbjct: 1246 MDTLPVDRYYPQEHHNGAYRPQTNF-GEEEQAAAYGRRRNDHGWGPDY 1292


>03_02_0168 +
           6094658-6096220,6096335-6096608,6096671-6096821,
           6097052-6097262,6097344-6097550,6097982-6098350
          Length = 924

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 431 LMVEWFQDGCFYVFLEVSYIHHHTSLR 351
           L+V W+Q G FY F    + HH T  R
Sbjct: 632 LLVRWYQVGAFYPFFR-GHAHHDTKRR 657


>09_06_0176 + 21351884-21352693,21352821-21352976,21353425-21353613,
            21354741-21356354,21356446-21356553,21356649-21357509,
            21357586-21357632,21358591-21358697,21359512-21359630,
            21359706-21359915,21360412-21360693,21360820-21360952,
            21361256-21361413,21362564-21362647,21362949-21363035
          Length = 1654

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = -1

Query: 285  IYHKLFCSLRHLKTGCAAYERN*KFHGVLLIQ*VKKTLCNSNNSIENSNTVRI 127
            I H+  C    L    +A+E+N     VLL+  VK TLC   N      TV++
Sbjct: 1358 IVHEDLCIAEKLYRIFSAWEKNEHSKTVLLLTDVKTTLCGIVNDSNMFQTVKL 1410


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,339,567
Number of Sequences: 37544
Number of extensions: 331833
Number of successful extensions: 628
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)