Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_O23
         (903 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    30   2.6  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    28   7.9  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    28   7.9  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    28   7.9  

>Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical
           protein C33B4.3b protein.
          Length = 993

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/47 (29%), Positives = 14/47 (29%)
 Frame = +2

Query: 518 PPPXPPXXXXSXXFFXKKXFXPXXXXXXXPPPKXFXXXXGGKXPPXP 658
           PPP PP             F P       PPP        G  PP P
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPP 812


>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
           protein C33B4.3a protein.
          Length = 1110

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/47 (29%), Positives = 14/47 (29%)
 Frame = +2

Query: 518 PPPXPPXXXXSXXFFXKKXFXPXXXXXXXPPPKXFXXXXGGKXPPXP 658
           PPP PP             F P       PPP        G  PP P
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPP 812


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +2

Query: 605 PPPKXFXXXXGGKXPPXPXGGL 670
           PPP       GG  PP P GGL
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGL 735


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +2

Query: 605 PPPKXFXXXXGGKXPPXPXGGL 670
           PPP       GG  PP P GGL
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGL 735


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +2

Query: 605 PPPKXFXXXXGGKXPPXPXGGL 670
           PPP       GG  PP P GGL
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGL 318


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,319,890
Number of Sequences: 27780
Number of extensions: 81850
Number of successful extensions: 126
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)