Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_O18
         (1193 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    31   0.066
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   7.6  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP protein.
          Length = 151

 Score = 31.1 bits (67), Expect = 0.066
 Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
 Frame = +1

Query: 991  PPPXL-APXRXG---GRPTRXPSXLXXGGXHPXXXFXXXPPPXXLXVXXLPPXXXTPPPP 1158
            PPP +  P R G   G P   P  +   G  P       PPP  +    +PP      PP
Sbjct: 79   PPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTMGMPPMGLGMRPP 138

Query: 1159 LXXXPSP 1179
            +     P
Sbjct: 139  VMSAAPP 145


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 1129 PPXXXTPPPPLXXXPSP 1179
            PP    PPPP+   PSP
Sbjct: 581  PPPAPPPPPPMGPPPSP 597


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -1

Query: 1178 GEGXXXSGGGGVXXXGGSXXTXRXXGGG 1095
            G G   SGGG     GGS       GGG
Sbjct: 201  GAGGGGSGGGAPGGGGGSSGGPGPGGGG 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,491
Number of Sequences: 2352
Number of extensions: 9370
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 135295257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)