Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_O18
(1193 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.30
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.30
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.30
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.92
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.6
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 31 2.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 3.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.9
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 6.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 8.6
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 8.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.30
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 833 PPXPXPXXGGCPPPP 877
PP P P GGCPPPP
Sbjct: 758 PPPPPPPPGGCPPPP 772
Score = 31.9 bits (69), Expect = 0.92
Identities = 21/56 (37%), Positives = 21/56 (37%)
Frame = +1
Query: 991 PPPXLAPXRXGGRPTRXPSXLXXGGXHPXXXFXXXPPPXXLXVXXLPPXXXTPPPP 1158
PPP L P G P P GG P PPP LPP PPPP
Sbjct: 715 PPPGLPPITGGPPPPPPP-----GGLPPITGGPPPPPPPG----GLPPISGGPPPP 761
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.30
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 833 PPXPXPXXGGCPPPP 877
PP P P GGCPPPP
Sbjct: 758 PPPPPPPPGGCPPPP 772
Score = 31.9 bits (69), Expect = 0.92
Identities = 21/56 (37%), Positives = 21/56 (37%)
Frame = +1
Query: 991 PPPXLAPXRXGGRPTRXPSXLXXGGXHPXXXFXXXPPPXXLXVXXLPPXXXTPPPP 1158
PPP L P G P P GG P PPP LPP PPPP
Sbjct: 715 PPPGLPPITGGPPPPPPP-----GGLPPITGGPPPPPPPG----GLPPISGGPPPP 761
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.30
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 833 PPXPXPXXGGCPPPP 877
PP P P GGCPPPP
Sbjct: 341 PPPPPPPPGGCPPPP 355
Score = 31.9 bits (69), Expect = 0.92
Identities = 21/56 (37%), Positives = 21/56 (37%)
Frame = +1
Query: 991 PPPXLAPXRXGGRPTRXPSXLXXGGXHPXXXFXXXPPPXXLXVXXLPPXXXTPPPP 1158
PPP L P G P P GG P PPP LPP PPPP
Sbjct: 298 PPPGLPPITGGPPPPPPP-----GGLPPITGGPPPPPPPG----GLPPISGGPPPP 344
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 0.92
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +2
Query: 794 GEQTPPXXFXKKXPPXPXPXXGGCPPPPXXXG 889
G PP F PP P P GG PPPP G
Sbjct: 82 GIPPPPPMFAGGIPPPP-PMMGGIPPPPPMFG 112
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.5 bits (68), Expect = 1.2
Identities = 23/80 (28%), Positives = 25/80 (31%), Gaps = 3/80 (3%)
Frame = +1
Query: 943 PPPTEXXRGGXXXQNXPPPXLAPXRXGGRPTR-XPSXLXXG--GXHPXXXFXXXPPPXXL 1113
PPPT G PPP + G P+R P G P PPP
Sbjct: 559 PPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQ 618
Query: 1114 XVXXLPPXXXTPPPPLXXXP 1173
P PPPP P
Sbjct: 619 SFGMAPISSAAPPPPPPPPP 638
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.5 bits (68), Expect = 1.2
Identities = 23/80 (28%), Positives = 25/80 (31%), Gaps = 3/80 (3%)
Frame = +1
Query: 943 PPPTEXXRGGXXXQNXPPPXLAPXRXGGRPTR-XPSXLXXG--GXHPXXXFXXXPPPXXL 1113
PPPT G PPP + G P+R P G P PPP
Sbjct: 385 PPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQ 444
Query: 1114 XVXXLPPXXXTPPPPLXXXP 1173
P PPPP P
Sbjct: 445 SFGMAPISSAAPPPPPPPPP 464
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.6
Identities = 26/86 (30%), Positives = 28/86 (32%), Gaps = 7/86 (8%)
Frame = +1
Query: 943 PPPTEXXRGGXXXQNXPPPXLA----PXRXGGRP---TRXPSXLXXGGXHPXXXFXXXPP 1101
PPP + + PPP A P R G P T P GG P PP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 1102 PXXLXVXXLPPXXXTPPPPLXXXPSP 1179
P PP PPP P P
Sbjct: 300 PPP--PRGSPPTGSLPPPQAGGSPPP 323
Score = 30.7 bits (66), Expect = 2.1
Identities = 19/72 (26%), Positives = 23/72 (31%)
Frame = +1
Query: 964 RGGXXXQNXPPPXLAPXRXGGRPTRXPSXLXXGGXHPXXXFXXXPPPXXLXVXXLPPXXX 1143
+ G + PP +P P + L G P PPP PP
Sbjct: 222 QNGFRGKRQAPPAGSPPPPP--PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 279
Query: 1144 TPPPPLXXXPSP 1179
PPPP P P
Sbjct: 280 PPPPPAGGSPPP 291
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.6
Identities = 26/86 (30%), Positives = 28/86 (32%), Gaps = 7/86 (8%)
Frame = +1
Query: 943 PPPTEXXRGGXXXQNXPPPXLA----PXRXGGRP---TRXPSXLXXGGXHPXXXFXXXPP 1101
PPP + + PPP A P R G P T P GG P PP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 1102 PXXLXVXXLPPXXXTPPPPLXXXPSP 1179
P PP PPP P P
Sbjct: 321 PPP--PRGSPPTGSLPPPQAGGSPPP 344
Score = 30.7 bits (66), Expect = 2.1
Identities = 19/72 (26%), Positives = 23/72 (31%)
Frame = +1
Query: 964 RGGXXXQNXPPPXLAPXRXGGRPTRXPSXLXXGGXHPXXXFXXXPPPXXLXVXXLPPXXX 1143
+ G + PP +P P + L G P PPP PP
Sbjct: 243 QNGFRGKRQAPPAGSPPPPP--PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 300
Query: 1144 TPPPPLXXXPSP 1179
PPPP P P
Sbjct: 301 PPPPPAGGSPPP 312
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.6
Identities = 26/86 (30%), Positives = 28/86 (32%), Gaps = 7/86 (8%)
Frame = +1
Query: 943 PPPTEXXRGGXXXQNXPPPXLA----PXRXGGRP---TRXPSXLXXGGXHPXXXFXXXPP 1101
PPP + + PPP A P R G P T P GG P PP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 1102 PXXLXVXXLPPXXXTPPPPLXXXPSP 1179
P PP PPP P P
Sbjct: 306 PPP--PRGSPPTGSLPPPQAGGSPPP 329
Score = 30.7 bits (66), Expect = 2.1
Identities = 19/72 (26%), Positives = 23/72 (31%)
Frame = +1
Query: 964 RGGXXXQNXPPPXLAPXRXGGRPTRXPSXLXXGGXHPXXXFXXXPPPXXLXVXXLPPXXX 1143
+ G + PP +P P + L G P PPP PP
Sbjct: 228 QNGFRGKRQAPPAGSPPPPP--PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 285
Query: 1144 TPPPPLXXXPSP 1179
PPPP P P
Sbjct: 286 PPPPPAGGSPPP 297
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 30.7 bits (66), Expect = 2.1
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +1
Query: 991 PPPXLAPXRXGGRPTRXPSXLXXGGXHPXXXFXXX-PPPXXLXVXXLPPXXXTPPPP 1158
PPP L P P P GG P + PPP L PP T PPP
Sbjct: 55 PPPSLPPSTMPPGPHGMP---FMGGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPP 108
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 833 PPXPXPXXGGCPPPPXXXG 889
PP P P GG PPPP G
Sbjct: 579 PPPPPPMLGGPPPPPPPPG 597
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = +1
Query: 964 RGGXXXQNXPPPXLAPXRXGGRPTRXPSXLXXGGXHPXXXFXXXPPPXXLXVXXLPPXXX 1143
RGG P P P P P + P PPP PP
Sbjct: 24 RGGCG--GCPTPMCQPRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPC 81
Query: 1144 TPPPPLXXXPS 1176
PPPP PS
Sbjct: 82 PPPPPPMPRPS 92
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 806 PPXXFXKKXPPXPXPXXGGCPPPP 877
PP PP P P CPPPP
Sbjct: 245 PPSPVCMPPPPPPCPMPIPCPPPP 268
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 8.6
Identities = 20/61 (32%), Positives = 23/61 (37%)
Frame = +1
Query: 991 PPPXLAPXRXGGRPTRXPSXLXXGGXHPXXXFXXXPPPXXLXVXXLPPXXXTPPPPLXXX 1170
PPP AP + G P + P GG P PPP P PPPP+
Sbjct: 321 PPPQGAPQQGFGAPPQGP---PQGG--PPQGSFGAPPPQQFHAPS-PQSFGGPPPPVSSA 374
Query: 1171 P 1173
P
Sbjct: 375 P 375
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 8.6
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 1096 PPPXXLXVXXLPPXXXTPPPPLXXXPSP 1179
PPP + PP PPPP P P
Sbjct: 73 PPPLISILQQAPPPPPPPPPPTLKAPPP 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,866,471
Number of Sequences: 27780
Number of extensions: 279248
Number of successful extensions: 901
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3276419812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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