Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_O13
         (891 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82053-2|CAB04835.1|  365|Caenorhabditis elegans Hypothetical pr...    43   3e-04
Z82269-7|CAB05204.2|  786|Caenorhabditis elegans Hypothetical pr...    38   0.013
Z82269-6|CAB05206.3|  809|Caenorhabditis elegans Hypothetical pr...    38   0.013
DQ143943-1|AAZ73241.1|  770|Caenorhabditis elegans RNA-decapping...    38   0.013
AL021488-8|CAJ43919.1|  786|Caenorhabditis elegans Hypothetical ...    38   0.013
AL021488-7|CAJ43918.1|  809|Caenorhabditis elegans Hypothetical ...    38   0.013
AC084268-2|AAL16324.1|  150|Caenorhabditis elegans Hypothetical ...    37   0.017
AL032625-2|CAB63351.1|  138|Caenorhabditis elegans Hypothetical ...    34   0.16 
Z68748-2|CAA92955.3|  374|Caenorhabditis elegans Hypothetical pr...    33   0.21 
U23484-4|AAC46768.2|  260|Caenorhabditis elegans Nudix family pr...    33   0.21 
AF305937-1|AAG37064.1|  348|Caenorhabditis elegans NADH pyrophos...    33   0.21 
AF067946-2|AAC17685.1|  223|Caenorhabditis elegans Nudix family ...    32   0.48 
U55855-1|AAA98017.1|  188|Caenorhabditis elegans Nudix family pr...    32   0.63 
Z83104-5|CAC35810.1|  570|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AB012700-1|BAA89795.1|  570|Caenorhabditis elegans FLR-4 protein.      30   1.9  
AF016682-3|AAB66186.2|  308|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z82288-4|CAB05321.1|  295|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z82053-2|CAB04835.1|  365|Caenorhabditis elegans Hypothetical
           protein T26E3.2 protein.
          Length = 365

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +3

Query: 474 WKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLR 590
           W +P G VE GE I++AV+REV EETG       +++L+
Sbjct: 104 WYMPAGRVEAGETIEEAVVREVKEETGYSCDVVELLSLQ 142


>Z82269-7|CAB05204.2|  786|Caenorhabditis elegans Hypothetical
           protein F52G2.1b protein.
          Length = 786

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = +3

Query: 471 HWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKA 650
           +W  P G + + E  +DA IRE  EETG +     I + +      F N  +  + ++K 
Sbjct: 267 NWGFPKGKINQAEPPRDAAIRETFEETGFDF---GIYSEKEKKFQRFINDGMVRLYLVKN 323

Query: 651 ISDTIN---KSEIEIXACQWMDVDE 716
           +    N   ++  EI   +W  +D+
Sbjct: 324 VPKDFNFQPQTRKEIRKIEWFKIDD 348


>Z82269-6|CAB05206.3|  809|Caenorhabditis elegans Hypothetical
           protein F52G2.1a protein.
          Length = 809

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = +3

Query: 471 HWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKA 650
           +W  P G + + E  +DA IRE  EETG +     I + +      F N  +  + ++K 
Sbjct: 290 NWGFPKGKINQAEPPRDAAIRETFEETGFDF---GIYSEKEKKFQRFINDGMVRLYLVKN 346

Query: 651 ISDTIN---KSEIEIXACQWMDVDE 716
           +    N   ++  EI   +W  +D+
Sbjct: 347 VPKDFNFQPQTRKEIRKIEWFKIDD 371


>DQ143943-1|AAZ73241.1|  770|Caenorhabditis elegans RNA-decapping
           protein protein.
          Length = 770

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = +3

Query: 471 HWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKA 650
           +W  P G + + E  +DA IRE  EETG +     I + +      F N  +  + ++K 
Sbjct: 251 NWGFPKGKINQAEPPRDAAIRETFEETGFDF---GIYSEKEKKFQRFINDGMVRLYLVKN 307

Query: 651 ISDTIN---KSEIEIXACQWMDVDE 716
           +    N   ++  EI   +W  +D+
Sbjct: 308 VPKDFNFQPQTRKEIRKIEWFKIDD 332


>AL021488-8|CAJ43919.1|  786|Caenorhabditis elegans Hypothetical
           protein F52G2.1b protein.
          Length = 786

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = +3

Query: 471 HWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKA 650
           +W  P G + + E  +DA IRE  EETG +     I + +      F N  +  + ++K 
Sbjct: 267 NWGFPKGKINQAEPPRDAAIRETFEETGFDF---GIYSEKEKKFQRFINDGMVRLYLVKN 323

Query: 651 ISDTIN---KSEIEIXACQWMDVDE 716
           +    N   ++  EI   +W  +D+
Sbjct: 324 VPKDFNFQPQTRKEIRKIEWFKIDD 348


>AL021488-7|CAJ43918.1|  809|Caenorhabditis elegans Hypothetical
           protein F52G2.1a protein.
          Length = 809

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = +3

Query: 471 HWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKA 650
           +W  P G + + E  +DA IRE  EETG +     I + +      F N  +  + ++K 
Sbjct: 290 NWGFPKGKINQAEPPRDAAIRETFEETGFDF---GIYSEKEKKFQRFINDGMVRLYLVKN 346

Query: 651 ISDTIN---KSEIEIXACQWMDVDE 716
           +    N   ++  EI   +W  +D+
Sbjct: 347 VPKDFNFQPQTRKEIRKIEWFKIDD 371


>AC084268-2|AAL16324.1|  150|Caenorhabditis elegans Hypothetical
           protein Y92H12BL.5 protein.
          Length = 150

 Score = 37.1 bits (82), Expect = 0.017
 Identities = 16/44 (36%), Positives = 28/44 (63%)
 Frame = +3

Query: 435 ILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVMEETGIEAS 566
           ++++V    D   W +PGG +E+ E  ++A  RE+MEE G+ A+
Sbjct: 40  LVLLVSGGKDGGKWVVPGGGIEKDECAEEAAHRELMEEAGVRAT 83


>AL032625-2|CAB63351.1|  138|Caenorhabditis elegans Hypothetical
           protein Y37H9A.6 protein.
          Length = 138

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +3

Query: 471 HWKLPGGYVERGEDIKDAVIREVMEETGI 557
           HW  P G+V+ GED   A IRE  EE  I
Sbjct: 31  HWTPPKGHVDPGEDEWQAAIRETKEEANI 59


>Z68748-2|CAA92955.3|  374|Caenorhabditis elegans Hypothetical
           protein F13H10.2 protein.
          Length = 374

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = +3

Query: 489 GYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIV-VMLKAISDTI 665
           G+   GE + +   RE+ EE GIE   DSI +L  S      +S + I  V +  I   I
Sbjct: 244 GFAHSGESMAECARREIAEEVGIEV--DSIRSLDMSQPWPMPDSSLMIAHVAVAKIDQKI 301

Query: 666 NKSEIEIXACQW 701
           +    E+   QW
Sbjct: 302 SVCPDELETAQW 313


>U23484-4|AAC46768.2|  260|Caenorhabditis elegans Nudix family
           protein 6 protein.
          Length = 260

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 420 NSQNQILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVMEE 548
           N    +  V  Q  D   W +PGG V+ GE +   + RE  EE
Sbjct: 125 NDNGDLEFVAVQRHDNGEWAIPGGMVDAGEHVSQTLRREFAEE 167


>AF305937-1|AAG37064.1|  348|Caenorhabditis elegans NADH
           pyrophosphatase protein.
          Length = 348

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = +3

Query: 489 GYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIV-VMLKAISDTI 665
           G+   GE + +   RE+ EE GIE   DSI +L  S      +S + I  V +  I   I
Sbjct: 218 GFAHSGESMAECARREIAEEVGIEV--DSIRSLDMSQPWPMPDSSLMIAHVAVAKIDQKI 275

Query: 666 NKSEIEIXACQW 701
           +    E+   QW
Sbjct: 276 SVCPDELETAQW 287


>AF067946-2|AAC17685.1|  223|Caenorhabditis elegans Nudix family
           protein 2 protein.
          Length = 223

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 477 KLPGGYVERGEDIKDAVIREVMEETG 554
           +LP G ++ GE  + A IRE+ EETG
Sbjct: 107 ELPAGLIDAGETAQQAAIRELKEETG 132


>U55855-1|AAA98017.1|  188|Caenorhabditis elegans Nudix family
           protein 3 protein.
          Length = 188

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 483 PGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKAISD 659
           PGG ++ GE   +  +RE  EE G+ A  +S+    H  + +   +D  +  ++  ISD
Sbjct: 35  PGGRMDPGETTTETALRETFEEIGVNA--ESVEIWGHLKSVIRRQADFNVTPIVGYISD 91


>Z83104-5|CAC35810.1|  570|Caenorhabditis elegans Hypothetical
           protein F09B12.6 protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +3

Query: 414 VFNSQNQILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVM-EETGIEASFDSIVTLR 590
           V N  N+I+  +  + D     +   Y+ RG  +KD +++E + E+T I+   +++  L 
Sbjct: 101 VTNDNNRIVNFLGIYADSNQMYIMSEYLPRGS-VKDLLVKETLGEDTAIKYLMETVEALD 159

Query: 591 HSHN 602
           + HN
Sbjct: 160 YLHN 163


>AB012700-1|BAA89795.1|  570|Caenorhabditis elegans FLR-4 protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +3

Query: 414 VFNSQNQILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVM-EETGIEASFDSIVTLR 590
           V N  N+I+  +  + D     +   Y+ RG  +KD +++E + E+T I+   +++  L 
Sbjct: 101 VTNDNNRIVNFLGIYADSNQMYIMSEYLPRGS-VKDLLVKETLGEDTAIKYLMETVEALD 159

Query: 591 HSHN 602
           + HN
Sbjct: 160 YLHN 163


>AF016682-3|AAB66186.2|  308|Caenorhabditis elegans Hypothetical
           protein T07D3.6 protein.
          Length = 308

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +2

Query: 179 DFLSILNNSLKKWSEQNKRCIWFKVNIKHADWVPILAKAGFDFHHS 316
           DFL +L+N++ KWS  ++R I   VN+ H+    + +K    F+ +
Sbjct: 108 DFLKMLDNNVCKWS--SERVIKVAVNLNHSPITYLNSKLDIIFYEN 151


>Z82288-4|CAB05321.1|  295|Caenorhabditis elegans Hypothetical
           protein ZK896.6 protein.
          Length = 295

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 281 ILAKAGFDFHHSXXQFCYDVQMVAYKQQSQFATSMPYKSWCRRY 412
           + A AG +FH +   F   +Q+V  + + + A++  YK+W   Y
Sbjct: 71  LAAIAGTEFHATYGNFWIGLQLVDGQWEWEDASTSTYKNWAPGY 114


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,736,961
Number of Sequences: 27780
Number of extensions: 313243
Number of successful extensions: 836
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)