Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_O10
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067219-14|AAC17034.1|  206|Caenorhabditis elegans Hypothetical...   191   5e-49
AF016687-11|ABL01528.1|  646|Caenorhabditis elegans Hypothetical...    32   0.62 
CU457737-1|CAM36322.1|  373|Caenorhabditis elegans Hypothetical ...    29   4.3  
AF016682-11|AAB66190.2|  270|Caenorhabditis elegans Hypothetical...    28   7.6  

>AF067219-14|AAC17034.1|  206|Caenorhabditis elegans Hypothetical
           protein R12E2.13 protein.
          Length = 206

 Score =  191 bits (466), Expect = 5e-49
 Identities = 95/181 (52%), Positives = 117/181 (64%), Gaps = 1/181 (0%)
 Frame = +1

Query: 178 AKNEFVTCGSILKLINTDLKLRLHSHDVKYGSGSGQQSVTAVEVSDDNNSHWLVRPMTGE 357
           A  +FVTC S+LK IN +   RLHSHDVKYGSGSGQQSVTAV+ SDD NSHW + P    
Sbjct: 21  ADEDFVTCYSVLKFINANDGSRLHSHDVKYGSGSGQQSVTAVKNSDDINSHWQIFPALNA 80

Query: 358 TCKRGAPIKCNTNIRLQHVATKKNLHSHFFTSPLS-GNQEVSCYXXXXXXXXXXXNWTVV 534
            C RG  IKC   IRL+H+ T   LHSH FT+PLS  +QEVS +           +WTV+
Sbjct: 81  KCNRGDAIKCGDKIRLKHLTTGTFLHSHHFTAPLSKQHQEVSAF-GSEAESDTGDDWTVI 139

Query: 535 CNNDYWRRDTPVKFRHVDTGSYLAGSGRTFGRPINGQGEIVGVSSQYGAYTDWQASEGLF 714
           CN D W      K RH  TGSYL+ SG+ FGRPI+GQ E+VG  S  G  + W+ +EG++
Sbjct: 140 CNGDEWLESEQFKLRHAVTGSYLSLSGQQFGRPIHGQREVVGTDSITGG-SAWKVAEGIY 198

Query: 715 V 717
           +
Sbjct: 199 I 199


>AF016687-11|ABL01528.1|  646|Caenorhabditis elegans Hypothetical
           protein T21D12.7 protein.
          Length = 646

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -2

Query: 660 SDNLALTIDGTTKCSPGACKIRSSINMSKFYWCISPPVVIVADHSPIVSTV 508
           S    L  D  T C  G C+      M   Y+C  PP++I+ +++PIV  V
Sbjct: 554 SPKTCLGWDDNTTCPQGKCQKA----MDGVYYCCRPPMMILQNNAPIVPQV 600


>CU457737-1|CAM36322.1|  373|Caenorhabditis elegans Hypothetical
           protein C52D10.1 protein.
          Length = 373

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 22/76 (28%), Positives = 36/76 (47%)
 Frame = +1

Query: 112 LSIATLVTVVFLISILSEKTEAAKNEFVTCGSILKLINTDLKLRLHSHDVKYGSGSGQQS 291
           +S +TL+T   LIS+ S K   +    V    I K  +  +K+ + S ++K  S S   S
Sbjct: 270 MSKSTLMTHEQLISVRSAKVRQSVKITVK-EQIPKSHDDKIKVSIVSPEIKSSSSSKNSS 328

Query: 292 VTAVEVSDDNNSHWLV 339
                ++ D+N  W V
Sbjct: 329 PPDARLNKDHNLEWCV 344


>AF016682-11|AAB66190.2|  270|Caenorhabditis elegans Hypothetical
           protein T07D3.1 protein.
          Length = 270

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 160 SEKTEAAKNEFVTCGSILKLINTDLKLRLHSHDVKYG 270
           S+ TE    +F+  G  ++L N DLKL L +  V  G
Sbjct: 55  SDDTEPTWEKFIEGGKSIQLCNNDLKLVLENRRVTLG 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,408,326
Number of Sequences: 27780
Number of extensions: 413335
Number of successful extensions: 1046
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)