Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_O06
         (1023 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0515 - 3864796-3865425                                           32   0.64 
06_03_0429 - 20701107-20701534,20701628-20701847                       30   3.4  
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983     30   3.4  
10_08_1037 - 22477358-22478752                                         29   5.9  
08_01_0059 - 394001-394708                                             29   5.9  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   7.9  

>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 20/73 (27%), Positives = 22/73 (30%)
 Frame = +3

Query: 507 PSXXXGPXXQPXXXPXXIVRXAPPXXXXXAPPPPXXRXXPSPGXAPXXXGXXXXXXXPSP 686
           P    GP   P   P  +    PP      PPPP     P P   P           PSP
Sbjct: 62  PPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPP----------PPSP 111

Query: 687 XRXXPLXPXGXXP 725
            +  P  P    P
Sbjct: 112 VKSSPPPPPAWSP 124


>06_03_0429 - 20701107-20701534,20701628-20701847
          Length = 215

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 17/46 (36%), Positives = 17/46 (36%)
 Frame = +3

Query: 507 PSXXXGPXXQPXXXPXXIVRXAPPXXXXXAPPPPXXRXXPSPGXAP 644
           PS    P   P   P   V  A P      PPPP     PSP  AP
Sbjct: 139 PSPAPAPAASPIAKPPAAVTAATPP-----PPPPPPSPSPSPSPAP 179


>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
          Length = 448

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 16/46 (34%), Positives = 16/46 (34%)
 Frame = -3

Query: 709 GXSGXXRXGLGXXXXXXXPXXXGAXPGDGXXRXXGGGGAXXXXXGG 572
           G  G    GLG           GA PG G     GGGG      GG
Sbjct: 244 GGGGGGNCGLGLGFGEGTGFGVGAGPGAGTGAITGGGGGGKGGGGG 289


>10_08_1037 - 22477358-22478752
          Length = 464

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 18/49 (36%), Positives = 19/49 (38%)
 Frame = +3

Query: 570 APPXXXXXAPPPPXXRXXPSPGXAPXXXGXXXXXXXPSPXRXXPLXPXG 716
           APP      PPPP     PSPG  P   G       P+P    PL   G
Sbjct: 360 APPHHPHPPPPPP----VPSPGILPSPSG-FLNLLSPTPRSPYPLLSPG 403


>08_01_0059 - 394001-394708
          Length = 235

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 17/67 (25%), Positives = 17/67 (25%)
 Frame = +3

Query: 525 PXXQPXXXPXXIVRXAPPXXXXXAPPPPXXRXXPSPGXAPXXXGXXXXXXXPSPXRXXPL 704
           P   P   P       PP      PP P  R  P P   P           P P    P 
Sbjct: 3   PPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPP 62

Query: 705 XPXGXXP 725
            P    P
Sbjct: 63  APVPPPP 69


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/38 (34%), Positives = 13/38 (34%)
 Frame = +3

Query: 573 PPXXXXXAPPPPXXRXXPSPGXAPXXXGXXXXXXXPSP 686
           PP      PPPP     PSP   P   G       P P
Sbjct: 345 PPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,238,735
Number of Sequences: 37544
Number of extensions: 127847
Number of successful extensions: 996
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3001039372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)