Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_N23
(1055 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 113 2e-25
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 113 2e-25
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 107 1e-23
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 107 1e-23
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 107 1e-23
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 75 1e-13
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 63 3e-10
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 58 1e-08
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 50 4e-06
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 50 4e-06
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 41 0.002
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 40 0.002
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 39 0.005
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 36 0.049
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 35 0.085
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 35 0.085
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 34 0.15
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 34 0.20
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 32 0.60
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 31 1.0
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 31 1.0
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 31 1.8
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 29 5.6
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 113 bits (273), Expect = 2e-25
Identities = 66/106 (62%), Positives = 68/106 (64%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIXXRIHT 289
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI + T
Sbjct: 8 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI-QKEST 66
Query: 290 SPGFET*RRYN*TFXXXXXXXXITVXK*FAXRCYARLHPRCYNCRK 427
R K +CYARL PR NCRK
Sbjct: 67 LHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRK 112
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +3
Query: 279 ESTLHLVLRLKGGTIEPSLR 338
ESTLHLVLRL+GG IEPSLR
Sbjct: 64 ESTLHLVLRLRGGIIEPSLR 83
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 113 bits (273), Expect = 2e-25
Identities = 66/106 (62%), Positives = 68/106 (64%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIXXRIHT 289
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI + T
Sbjct: 8 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI-QKEST 66
Query: 290 SPGFET*RRYN*TFXXXXXXXXITVXK*FAXRCYARLHPRCYNCRK 427
R K +CYARL PR NCRK
Sbjct: 67 LHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRK 112
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +3
Query: 279 ESTLHLVLRLKGGTIEPSLR 338
ESTLHLVLRL+GG IEPSLR
Sbjct: 64 ESTLHLVLRLRGGIIEPSLR 83
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 8 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 84 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 160 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 236 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 312 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Score = 105 bits (252), Expect = 5e-23
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
L GKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 388 LIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Score = 79.0 bits (186), Expect = 5e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAG 229
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAG
Sbjct: 464 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 64 ESTLHLVLRLRGG 76
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 140 ESTLHLVLRLRGG 152
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 216 ESTLHLVLRLRGG 228
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 292 ESTLHLVLRLRGG 304
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 368 ESTLHLVLRLRGG 380
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 444 ESTLHLVLRLRGG 456
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 8 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 84 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 160 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 236 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 312 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 464 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 540 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 593
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 616 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 669
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 692 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 745
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 768 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 821
Score = 105 bits (252), Expect = 5e-23
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
L GKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 388 LIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3
Query: 279 ESTLHLVLRLKGGTI 323
ESTLHLVLRL+GG I
Sbjct: 824 ESTLHLVLRLRGGDI 838
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 64 ESTLHLVLRLRGG 76
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 140 ESTLHLVLRLRGG 152
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 216 ESTLHLVLRLRGG 228
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 292 ESTLHLVLRLRGG 304
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 368 ESTLHLVLRLRGG 380
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 444 ESTLHLVLRLRGG 456
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 520 ESTLHLVLRLRGG 532
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 596 ESTLHLVLRLRGG 608
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 672 ESTLHLVLRLRGG 684
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 748 ESTLHLVLRLRGG 760
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 8 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 84 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 160 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 236 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 312 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 388 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 464 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 540 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 593
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 616 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 669
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 692 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 745
Score = 107 bits (258), Expect = 1e-23
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
LTGKTITLEVEASDTI NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 768 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 821
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 64 ESTLHLVLRLRGG 76
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 140 ESTLHLVLRLRGG 152
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 216 ESTLHLVLRLRGG 228
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 292 ESTLHLVLRLRGG 304
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 368 ESTLHLVLRLRGG 380
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 444 ESTLHLVLRLRGG 456
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 520 ESTLHLVLRLRGG 532
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 596 ESTLHLVLRLRGG 608
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 672 ESTLHLVLRLRGG 684
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 279 ESTLHLVLRLKGG 317
ESTLHLVLRL+GG
Sbjct: 748 ESTLHLVLRLRGG 760
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 279 ESTLHLVLRLKGGTI 323
+STLHLVLRL+GG I
Sbjct: 824 QSTLHLVLRLRGGDI 838
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 74.5 bits (175), Expect = 1e-13
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = +2
Query: 95 IRQEPLTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
I+ + LTGK I L++E +D + +K K+ +KEGIPP QQRLIFAGKQ+ D +T +DY +
Sbjct: 3 IKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKV 61
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 63.3 bits (147), Expect = 3e-10
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
L GKTI + ++ +DT+ +K K+ +K G+PPDQQRLIF QLE+ R L YNI
Sbjct: 168 LFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNI 221
Score = 33.5 bits (73), Expect = 0.26
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
+TG IT VEASD I ++ K+ + + P ++ +D RT+SDYNI
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNI 145
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 58.0 bits (134), Expect = 1e-08
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIP 199
LTGKTITLEVEASDTI NVKAKI DKEGIP
Sbjct: 8 LTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 49.6 bits (113), Expect = 4e-06
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +2
Query: 119 KTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLED 244
+T+ LEV A++ + ++K KI EGIP ++QRL +AG+QLED
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED 50
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 49.6 bits (113), Expect = 4e-06
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +2
Query: 119 KTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLED 244
+T+ LEV A++ + ++K KI EGIP ++QRL +AG+QLED
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED 50
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 116 GKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
G + ++ DT+ ++K I + IP L F+GK+LED ++ DYNI
Sbjct: 162 GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +2
Query: 116 GKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLE---DGRTLSD 262
G+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+ D TL D
Sbjct: 111 GRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFD 162
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 39.1 bits (87), Expect = 0.005
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2
Query: 119 KTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGK 232
+T+ LEV A++ + ++K KI EGIP ++QRL +A +
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 35.9 bits (79), Expect = 0.049
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
L GKT TL V ASDT+ K ++ R+ + GK L D T +YNI
Sbjct: 49 LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 35.1 bits (77), Expect = 0.085
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = +2
Query: 113 TGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
+G L V SDTI VK I + R++ K LED TL+ YNI
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNI 233
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 35.1 bits (77), Expect = 0.085
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 131 LEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
L V SDTI ++K +I + R++ GK LED +L+ YNI
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNI 256
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 34.3 bits (75), Expect = 0.15
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 59 CTFFIASNTSANIRQEPLTGKTITLEVEASDTIXNVKAKIXDKEG--IPPDQQRLIFAGK 232
C+F ++ LT LE+ TI VKA + ++G P+ Q+LI+ GK
Sbjct: 42 CSFINNQMMVLSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGK 101
Query: 233 QLED 244
L+D
Sbjct: 102 ILDD 105
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 33.9 bits (74), Expect = 0.20
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +2
Query: 131 LEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
L V SDTI +K +I GI R K LED TL+ YNI
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNI 222
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 32.3 bits (70), Expect = 0.60
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
L G I +E+++ DTI V + G+ +QRL+ K+L+ +TL + I
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGI 242
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIXXR 280
+ G + ++ + + +K +I D+ G+P +Q+L+ G ++D + + YN+ R
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADR 640
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIXXR 280
+ G + ++ + + +K +I D+ G+P +Q+L+ G ++D + + YN+ R
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADR 640
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 110 LTGKTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDY 265
+ G+ ++ +++ +K KI + GIP + L GK L D + L+DY
Sbjct: 150 MPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 101 QEPLTG--KTITLEVEASDTIXNVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 271
Q+ TG + +TL + + I ++ + IP D+ ++F GK+L + D ++
Sbjct: 10 QDRKTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSL 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,463,875
Number of Sequences: 27780
Number of extensions: 198098
Number of successful extensions: 385
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2814342022
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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