Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_N20
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004...    30   2.9  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  

>04_04_0824 -
           28399144-28399385,28400193-28400312,28400422-28400453,
           28400531-28400625,28400713-28400786,28400883-28401018,
           28401096-28401333,28401508-28401555,28401593-28401780,
           28401862-28401983,28402061-28402226,28402321-28402443,
           28403068-28403139,28403244-28403351,28404212-28404328,
           28404458-28404596,28404702-28404808,28404904-28405013,
           28405141-28405274,28405348-28405497,28405571-28405791,
           28405868-28406677,28410261-28410473
          Length = 1254

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 25/86 (29%), Positives = 29/86 (33%)
 Frame = -1

Query: 874 KXGFXXGXXXKXDXYPDKGXPVXXEXGGXGKPXPGLXRXDXXPXXXXPTGVGYXGXRHAX 695
           + G   G   +   +P  G P     GG G   PG    D         G G  G  H  
Sbjct: 140 RGGHYQGRGGQGSHHPGGGPPEYQGRGGPGSHHPGGGPPDY-------QGRGGSGSHH-- 190

Query: 694 PKGGKXDRXPVXGQGRXQESARGSFP 617
           P GG  +  P   QGR     RG  P
Sbjct: 191 PGGGPPEYQPRDYQGRGGPRPRGGMP 216


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +2

Query: 338 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 493
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 287 NESAN---ARGEAVCVLGALPLPRSLTRCAR 370
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,760,640
Number of Sequences: 37544
Number of extensions: 431836
Number of successful extensions: 1074
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)