Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_N19
         (900 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024221-1|ABC86283.1| 1241|Drosophila melanogaster RE04053p pro...    39   0.008
AE014298-1113|AAF46314.1| 1241|Drosophila melanogaster CG2253-PA...    39   0.008

>BT024221-1|ABC86283.1| 1241|Drosophila melanogaster RE04053p protein.
          Length = 1241

 Score = 39.1 bits (87), Expect = 0.008
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 62   KQEMERVKRLTLNIXXXXXXXXXXXXXXXXXXXXXNPNRGQHV-RQKYQHPKGAPDADLI 238
            ++E E+VKRLTLNI                       +  Q   + K++H KGAPDADLI
Sbjct: 1180 REEKEKVKRLTLNITERIEEEDYQESLMPPQHRNFTQSYYQKPNKHKFKHQKGAPDADLI 1239

Query: 239  F 241
            F
Sbjct: 1240 F 1240


>AE014298-1113|AAF46314.1| 1241|Drosophila melanogaster CG2253-PA
            protein.
          Length = 1241

 Score = 39.1 bits (87), Expect = 0.008
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 62   KQEMERVKRLTLNIXXXXXXXXXXXXXXXXXXXXXNPNRGQHV-RQKYQHPKGAPDADLI 238
            ++E E+VKRLTLNI                       +  Q   + K++H KGAPDADLI
Sbjct: 1180 REEKEKVKRLTLNITERIEEEDYQESLMPPQHRNFTQSYYQKPNKHKFKHQKGAPDADLI 1239

Query: 239  F 241
            F
Sbjct: 1240 F 1240


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,629,476
Number of Sequences: 53049
Number of extensions: 289187
Number of successful extensions: 547
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)