Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_N18
         (966 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.4  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   4.2  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    29   5.5  
07_03_0600 + 19866757-19867218,19867920-19868429                       29   7.3  
03_06_0599 + 34984869-34985319,34986581-34987563                       28   9.7  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -3

Query: 367 PPXXXGGGXTPQKXFXXXGAPXPPPQXGXPPPP 269
           PP        P        AP PPP  G PPPP
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPP 348



 Score = 30.3 bits (65), Expect = 2.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 335 PKKXXXXGGPPXPPPXGXAPPP 270
           P      G PP PPP G +PPP
Sbjct: 345 PPPPPAKGPPPPPPPKGPSPPP 366



 Score = 29.5 bits (63), Expect = 4.2
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 313 GAPXPPPQXGXPPPP 269
           G P PPP  G PPPP
Sbjct: 343 GPPPPPPAKGPPPPP 357


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
 Frame = -2

Query: 350  GGXHTPKKXXXXGGPPXPPP----XGXAPPP 270
            GG   P      GGPP PPP     G  PPP
Sbjct: 1146 GGVPPPPPVGGLGGPPAPPPPAGFRGGTPPP 1176



 Score = 29.1 bits (62), Expect = 5.5
 Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
 Frame = -3

Query: 367  PPXXXGGGXTPQKXFXXXGAPXPPPQ----XGXPPPP 269
            PP     G  P       GAP PPP      G PPPP
Sbjct: 1089 PPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPP 1125



 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -3

Query: 367  PPXXXGGGXTPQKXFXXXGAPXPPPQXGXPPPP 269
            PP   GG   P         P PP   G PPPP
Sbjct: 1188 PPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPP 1220


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 314 GGPPXPPPXGXAPPP 270
           GGPP PPP    PPP
Sbjct: 262 GGPPRPPPPQVPPPP 276



 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -3

Query: 409 KTQXPQFSQKKNFXPPXXXGGGXTPQKXFXXXGAPXPPPQXGXPPPP 269
           KT+ P+ ++          G G  P+        P PPPQ   PPPP
Sbjct: 241 KTRQPEANKPPAAPGTLPNGSGGPPRPP--PPQVPPPPPQAPPPPPP 285


>07_03_0600 + 19866757-19867218,19867920-19868429
          Length = 323

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
 Frame = -3

Query: 415 QKKTQXPQFSQKKNFXPPXXXGGGXT----PQKXFXXXGAPXPPPQXGXPPPP 269
           Q++     + Q++   PP     G      PQ+     G P PPP    PPPP
Sbjct: 34  QQQPPPQPYCQQQQPLPPHYYQAGPPHAPPPQQPPAMWGQPPPPPPQYAPPPP 86


>03_06_0599 + 34984869-34985319,34986581-34987563
          Length = 477

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 310 APXPPPQXGXPPPP 269
           AP PPPQ   PPPP
Sbjct: 397 APPPPPQPPPPPPP 410


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,068,578
Number of Sequences: 37544
Number of extensions: 264954
Number of successful extensions: 3351
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2591
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)