Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_N16
         (862 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.6  
01_06_0826 - 32252546-32253208                                         30   2.7  
06_01_0438 + 3110703-3111945,3112486-3113057                           29   6.3  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.3  
11_06_0527 + 24672649-24672707,24673459-24673817,24674366-246744...    28   8.3  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.3  
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434...    28   8.3  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +1

Query: 520 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 678
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>01_06_0826 - 32252546-32253208
          Length = 220

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +2

Query: 584 EVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPSGSVALSHSS 730
           EV+KP R +   G     LP  L+C    A  +    SP+G  A S SS
Sbjct: 5   EVSKPSRRLSPKGSFKLSLPSLLACGQCKATAVSPPESPTGVGARSFSS 53


>06_01_0438 + 3110703-3111945,3112486-3113057
          Length = 604

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -2

Query: 156 HCILVVVCPNSSMYLIMSGSN*PSAKGRSAAAVP 55
           HC + +VC +S+  L++S    P+    ++AA+P
Sbjct: 64  HCFVEIVCADSAGRLLLSAKPRPAPAATTSAALP 97


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 352 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 507
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>11_06_0527 +
           24672649-24672707,24673459-24673817,24674366-24674435,
           24674656-24674730,24674731-24674846,24674975-24675006,
           24675117-24675242,24675379-24675537,24675886-24675978,
           24676069-24676236,24676388-24676486,24676603-24676820,
           24676900-24676957,24677421-24677509,24677590-24677721,
           24678000-24678122,24678568-24678666,24678774-24678965,
           24679127-24679298,24679416-24679572,24679704-24679906,
           24680105-24680246,24680324-24680484,24680585-24680701,
           24680788-24680874
          Length = 1101

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
 Frame = +3

Query: 561 HKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTLPLTGYLSAFLLREAWRFLIAHAVG 740
           H+ +R  +R  N T + ++  F    +  R     LP        LL + W  L A  + 
Sbjct: 296 HRTQRYIKRKNNDTTIVKHVDF---DAPTREGAQLLPDDKKQDELLLEDIWTLLRAGRLE 352

Query: 741 -ISVRCRSXAPSWAVCTNPPF 800
             S  CRS   SW   T  PF
Sbjct: 353 EASELCRSAGQSWRAATLCPF 373


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 301 NESAN---ARGEAVCVLGALPLPRSLTRCAR 384
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
            26643948-26644120,26644227-26644308,26644623-26644758,
            26644777-26644833,26644905-26645120,26645939-26646335,
            26646458-26646544,26647063-26647324,26648892-26648972,
            26649176-26650350
          Length = 1221

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 725  YEKAPRFPKEKGGQVSGKRQGRNR 654
            ++  PRFP ++GG   G+RQG+ +
Sbjct: 1137 HQNLPRFPPQQGGGNIGERQGQGQ 1160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,845,581
Number of Sequences: 37544
Number of extensions: 509422
Number of successful extensions: 1554
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)