Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_N14
         (862 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    25   0.68 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.90 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       24   2.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.6  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   3.6  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   8.4  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              22   8.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   8.4  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    22   8.4  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 25.4 bits (53), Expect = 0.68
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +2

Query: 581 SPPSNQKRSKIRKRAGSTYLPPPNQYTRYPSMPHNPYGAPMHT 709
           SPP   KR   ++        PP +  + PSMP  P     HT
Sbjct: 620 SPPVTTKRDGTQETEERLPPLPPKRIRKMPSMPLLPRPISCHT 662


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +3

Query: 462 RHCLMQRHHHHCALTSTTCSTLRRANSQTT*HRKEAMNPSVPLRIKND-LRLENGQ 626
           RH  +Q HHHH  L ST      R   Q    ++         R++ D +++E G+
Sbjct: 140 RHHHLQNHHHH--LQSTAVQDHHRPYQQQQQQQQRQQQRQEERRLRPDEIKVEVGE 193


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +2

Query: 473 DATSPSPLRVDLDDLLYSPEGQQPDYVAQEGSNEPFSP 586
           D    +PLR DL  +L       PD++    +N  F P
Sbjct: 556 DPEEDAPLRGDLVRILKQANQSVPDWMMGGNANRNFMP 593


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 773 SLXVLVDGLXXXLASNSGCITVCAS 699
           +L +L DG+   +A N+G + V A+
Sbjct: 120 NLPILKDGVQIFIAPNNGAVKVLAN 144


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 773 SLXVLVDGLXXXLASNSGCITVCAS 699
           +L +L DG+   +A N+G + V A+
Sbjct: 158 NLPILKDGVQIFIAPNNGAVKVLAN 182


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 239  GKC*SRVYVASVRFKKLYHENPFSVDD 319
            G C S V V++   KK+Y +N + VD+
Sbjct: 926  GGCSSLVDVSTPVNKKVYKQNDYIVDE 952


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 613 NLRSFLIRRGTEGFIASFLCYV 548
           N+  F +RRG +GF    L Y+
Sbjct: 207 NVLRFWLRRGFDGFRVDALPYI 228


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 157 IEIET*QLYFICGLLFRVIVEQDGRHERKVLKQ 255
           IE E  QLY  C +     V++DG     V ++
Sbjct: 54  IEDENVQLYIECAMKKFSFVDKDGNFNEHVSRE 86


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 613 NLRSFLIRRGTEGFIASFLCYV 548
           N+  F +RRG +GF    L Y+
Sbjct: 207 NVLRFWLRRGFDGFRVDALPYI 228


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 575 PFSPPSNQKRSKIRKRAGSTYLPPPNQ 655
           P  PP+N+  S +   A      PPNQ
Sbjct: 53  PGPPPNNEDSSGVIVGASGYGFVPPNQ 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,166
Number of Sequences: 438
Number of extensions: 5030
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)